Research Article |
Corresponding author: Guang-Yao Yang ( yanggy2004@126.com ) Corresponding author: Wen-Gen Zhang ( wgzhang@jxau.edu.cn ) Academic editor: Eduardo Ruiz-Sanchez
© 2023 Cheng-Kun Wang, Rong Guo, Chun-Ce Guo, Guang-Yao Yang, Wen-Gen Zhang.
This is an open access article distributed under the terms of the Creative Commons Attribution License (CC BY 4.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
Citation:
Wang C-K, Guo R, Guo C-C, Yang G-Y, Zhang W-G (2023) Gelidocalamus zixingensis (Poaceae, Bambusoideae, Arundinarieae), a new species from southern China revealed by morphological and molecular evidence. PhytoKeys 218: 29-45. https://doi.org/10.3897/phytokeys.218.96849
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The genus Gelidocalamus T. H. Wen, endemic to southern China, is a small but taxonomically problematic genus of Arundinarieae (Poaceae, Bambusoideae). During field work, a population of Gelidocalamus from Zixing, Hunan, was discovered, appearing to be distinct from our previously identified collection. Comparisons of the population of Zixing were performed by using scanning electron microscopy (SEM) and a plastid genome-based phylogeny. Morphologically, it was mostly similar to G. multifolius, but differed by culm leaf erect with densely white pubescence, apical branch sheath much longer than the internodes and foliage leaf larger. Phylogenetically, the new species was well-supported as a sister to the clade of G. multifolius + G. tessellatus, and the above three taxa were clustered in the Shibataea clade (IV) of Arundinarieae. Thus, the new species, formally named as Gelidocalamus zixingensis W.G.Zhang, G.Y.Yang & C.K.Wang, was described and illustrated herein.
Gramineae, leaf epidermis, phylogeny, SEM, temperate woody bamboo
Arundinarieae (Poaceae: Bambusoideae), i.e., accommodating the temperate woody bamboos, including ca. 581 species in 31 genera (
As a small but taxonomically problematic genus of Arundinarieae, Gelidocalamus T. H. Wen, 1982, containing ca. 11 species (
Molecular studies of the tribe Arundinarieae have indicated that the conventionally circumscribed Gelidocalamus was polyphyletic, and its “spring-shoot” species were nested with members of Ferrocalamus Hsueh & Keng f., 1982, Shibataea Makino ex Nakai, 1912, Indocalamus Nakai, 1925, and other close relatives (
During field work in August 2014, a population of Gelidocalamus sp. in Zixing City of Hunan Province, China (25°54'1.75"N, 11°34'9.18"E), was found, and mistakenly identified as G. multifolius due to a somewhat similar morphology. In this study, a detailed comparison among the new species, G. multifolius and G. tessellatus, including characters obtained with scanning electron microscope (SEM) of the foliage leaf epidermis, was made. Moreover, the phylogenetic relationships of the new species including above taxa and allied genera were reassessed based on complete chloroplast genomes.
Mature bamboo leaves were collected from the individuals of the type localities: G. sp from Zixing, Lianping Township of Zixing City in Hunan; G. stellatus, Xiazhuang of Jinggang Mountain in Jiangxi; G. tessellatus, Maolan of Libo County in Guizhou; G. multifolius, Jiuyi Mountain of Ningyuan County in Hunan. Foliage leaves were fixed with the FAA (acetic acid: formalin: ultrapure water: ethanol = 1:2:3:14), and some dried in silica-gel for storage. All voucher specimens were deposited in the herbarium of the College of Forestry, Jiangxi Agricultural University, China (
After cleaning in the ultrasonic cleaner CPX2800H-C (Branson, USA), the middle portion of foliage leaf (5×5 mm) was dried at room temperature, mounted on stubs, and coated with gold sputtering. Using a scanning electron microscope S-4800 (Hitachi, Japan), leaf epidermal characters were observed and photographed. Terminology for epidermal appendages and leaf blades follows previous studies (
Total genomic DNA was isolated from foliage leaves dried over silica-gel by a modified CTAB method (
To determine the position of the new species, phylogenetic analyses using maximum likelihood (ML) and Bayesian inference (BI) were performed. Besides G. sp. from Zixing (OP920758) and G. multifolius (OP920759), another 18 complete chloroplast genomes of the tribe Arundinarieae were obtained from the National Center for Biotechnology Information (NCBI, https://www.ncbi.nlm.nih.gov/). Hsuehochloa calcarea (C. D. Chu & C. S. Chao) D. Z. Li & Y. X. Zhang, 2018 was selected as outgroup (Genbank accession numbers see the Table
Species | GenBank accession |
---|---|
Ingroup | |
Acidosasa purpurea (Hsueh & T.P.Yi) Keng f. | HQ337793 |
Ampelocalamus actinotrichus (Merr. et Chun) S. L. Chen, T. H. Wen et G. Y. Sheng | MH410123 |
Arundinaria gigantea (Walter) Muhl. | NC_020341 |
Bergbambos tessellata (Nees) Stapleton | NC_036816 |
Gaoligongshania megalothyrsa (Handel-Mazzetti) D. Z. Li | JX513419 |
Gelidocalamus multifolius B. M. Yang | OP920759 |
Gelidocalamus tessellatus Wen & C. C. Chang | NC_024719 |
Gelidocalamus zixingensis W.G.Zhang, G.Y.Yang & C.K.Wang | OP920758 |
Himalayacalamus gyirongensis (Munro) P. C. Keng | NC_043943 |
Indocalamus sinicus (Hance) Nakai | NC_036819 |
Ravenochloa wilsonii (Rendle) D. Z. Li & Y. X. Zhang | JX513421 |
Kuruna debilis (Thwaites) Attigala, Kaththr. & L.G.Clark | NC_036822 |
Oldeania alpina (K.Schum.) Stapleton | NC_036813 |
Phyllostachys edulis (Carriere) J. Houzeau | MW007170 |
Pleioblastus amarus (Keng) Keng f. | MH988736 |
Sinoasa longiligulata (McClure) N.H.Xia, Q.M.Qin & J.B.Ni | NC_036825 |
Shibataea chiangshanensis Wen | NC_036826 |
Shibataea kumasasa (Zollinger ex Steudel) Makino ex Nakai | KU523578 |
Thamnocalamus spathiflorus (Trinius) Munro | JX513425 |
Outgroup | |
Hsuehochloa calcarea (C.D.Chu & C.S.Chao) D.Z.Li & Y.X.Zhang | KJ496369 |
After alignment with MAFFT 7.450 (
Compared to G. tessellatus, G. zixingensis was mostly similar to G. multifolius in the habit, the morphological characters and new shoots sprouting season, but can be distinguished by the following morphological characters: (a) a ring of white-gray (vs. yellow-brown) appressed pubescence below each culm node; (b) culm leaf sheaths densely white pubescent (vs. glabrous), with brown patches (vs. pale brown), and erect (vs. reflexed) culm sheath blades; (d) branch leaf sheaths setose (vs. glabrous) and much longer, (>3cm) (vs. slightly longer, < 1cm or as long) as the internodes; foliage leaf blades mesophyll (vs. notophyll). (see Table
Morphological comparison among G. zixingensis, G. multifolius and G. tessellatus.
Characters | G. zixingensis | G. multifolius | G. tessellatus |
---|---|---|---|
Culm | glabrous, each node with a ring of white-gray appressed trichomes below. | glabrous, each node with a ring of yellow-brown appressed trichomes below. | sparsely setae, each node with a ring of golden appressed trichomes below. |
Culm leaf | sheath pubescent with brown patches, sparsely setae near the base, margin sparsely ciliate; oral setae 2–4 pairs; blade erect. | sheath glabrous with pale brown patches, margin sparsely ciliate; oral setae 3–6 pairs; blade reflexed. | sheath glabrous with purple patches, black setae, margin densely ciliate; oral setae 2–3 pairs; blade erect or reflexed. |
Branch | sheath papery, densely setae, without black spots, apical branch sheath longer ca. 3 cm than that of the internode. | sheath leathery, with black spots, pubescent, apical branch sheath longer 0.5–1cm than that of the internode. | sheath leathery, without black spots, sparsely setae, apical branch sheath equally or shorter than that of the internode. |
Foliage leaf | oral setae 1–3 pairs; blade mesophyll, 23–32×3.2–4.9 cm, lateral veins 6–8 pairs | oral setae weak or absent; blade notophyll, 8–14×1.5–2.5 cm, lateral veins 4–6 pairs | oral setae weak or absent; blade mesophyll, 17–35×3.7–5.4 cm, lateral veins 5–6 pairs |
Epidermal traits of the foliage leaf, e.g., short papillae, microhairs, silica bodies and prickles, can be clearly identified under the scanning electron microscope (Fig.
SEM images of the abaxial foliage leaf epidermis A G. zixingensis (Zixing, Hunan, China) B G. multifolius (Ningyuan, Hunan, China) C G. tessellatus (Libo, Guizhou, China) D G. stellatus (Jinggang Mountain, Jiangxi, China). Abbreviations: mi, microhairs; pr, prickles; sb, silica bodies; sp, short papillae; st, stomatal apparatuses.
Characters | G. zixingensis | G. multifolius | G. tessellatus | G. stellatus |
---|---|---|---|---|
Stomatal apparatus | 5 rows distributed between the veins | 4 rows distributed between the veins | 3 rows distributed between the veins; | 3 or 4 rows distributed between the veins |
Papillae | 8–10 surrounded the stomatal apparatus | |||
Microhair | bicellular, apical cell withered | |||
Prickle | sparsely distributed on the veins | sparsely distributed on the veins | relatively densely distributed on the veins | absent |
Silica body | saddle-shaped |
The complete chloroplast genome of Gelidocalamus zixingensis was 139,500 bp in length, comprising a large single copy (LSC) region of 83,007 bp, a small single copy (SSC) region of 12,809 bp and two inverted repeat (IR) regions of 21,842 bp, and its GC content was 39%. The chloroplast genome contained 132 genes, including 85 protein-coding genes, 39 transfer RNAs and 8 ribosomal RNAs (Fig.
Compared to that in G. zixingensis, the total length of chloroplast genome of G. multifolius and G. tessellatus was longer (>200bp), and the differences were mainly in the LSC region (Table
Characters | G. zixingensis | G. multifolius | G. tessellatus |
---|---|---|---|
Total length | 139,500 | 139,745 | 139,712 |
LSC region | 83,007 | 83,252 | 83,220 |
SSC region | 12,809 | 12,809 | 12,808 |
IR region | 21,842 | 21,842 | 21,842 |
Total genes | 132 | 132 | 132 |
CDS | 85 | 85 | 85 |
tRNA | 39 | 39 | 39 |
rRNA | 8 | 8 | 8 |
The majority-rule consensus tree with both maximum likelihood (ML) and Bayesian inference (BI) analyses was shown in Fig.
Phylogenetic consensus tree of the Gelidocalamus zixingensis based on plastid genome dataset with maximum likelihood and Bayesian analyses. Only bootstrap values (BS) ≥ 75% and posterior probabilities (PP)≥0.75 are indicated at each node, otherwise dashes. The green asterisk indicates support of 100% BS and 1.00 PP. The letters represent the major chloroplast marker-based clade (I-XII) in which the selected taxa are located.
The new species is morphologically similar to G. multifolius, but differs by having densely white pubescence (vs. glabrous) on the culm leaf sheaths, culm leaf blades erect (vs. reflexed); apical branch sheaths much longer (vs. slightly longer or equilong) than the internodes; foliage leaf blades mesophyll (vs. notophyll).
China. Hunan, Zixing County, Lianping Township, Chengkang Village, under the forest, 25°54'1.75"N, 11°34'9.18"E, elev. ca. 594 m, 18 Oct. 2015, W.G. Zhang et al. LPC031 (holotype:
Rhizomes leptomorph. Culms 1.7–4.2 m, 3.5–10 mm in diameter; erect, apically slightly nodding; internodes initially covered with white pubescence, ca. 14–35 cm long, wall 0.6–1.9 mm thick; each node with a ring of white-gray appressed pubescence below sheath scar; branching intravaginal, arising from 5th node above ground, ca. 4–11 (16) branches per node; branches equal or subequal, ca. 5–30 cm long. Culm leaves sheaths persistent, 12–19 cm, culm leaf sheath abaxially with brown patches, densely white pubescent and sparsely setose near the base; culm leaf blade erect, linear-lanceolate, 0.5–2 cm long, 2 mm wide, apex acuminate, base blunt or truncate, ca.1/3 as wide as sheath apex, oral setae 2–4 on each side of the sheath apex, ca. 4 mm long; auricles absent; ligule truncate, ca. 0.5 mm high, scabrous. Branch sheath papery, white setose, without black spots, margins ciliate; sub-apical branch sheath ca. 3 cm beyond the internode. Foliage leaves usually solitary on ultimate branches; ligule truncate, ca. 1 mm, scabrous; auricles absent; oral setae 1–3 pairs straight or curved; leaf blade broadly lanceolate, usually 23.4–32.5×3.2–4.9 cm, lateral veins 6–8 pairs, abaxial surface basally pubescent, base cuneate and asymmetrical, margins serrulate and slightly revolute near base.
New shoots in October.
The species epithet refers to the locality of the type specimen: Zixing County, Hunan, China.
Zī Xīng Duăn Zhī Zhú (Chinese pronunciation), 资兴短枝竹 (Chinese name).
To date, this species has only been found under evergreen broad-leaved forest along river banks at 500–600 m in Chengkang Village, Lianping Township, Zixing County. Species growing in the surrounding area include Quercus myrsinifolia Blume, 1871 (Fagaceae), Aralia chinensis L., 1868 (Araliaceae), Eurya japonica Thunb., 1783 (Pentaphylacaceae), and Liriope spicata (Thunb.) Lour., 1790 (Asparagaceae).
1 | Culm internodes glabrous | 2 |
– | Culm internodes hairy | 5 |
2 | Culm leaf sheaths glabrous | 3 |
– | Culm leaf sheaths pubescent with sparse setae | Gelidocalamus zixingensis |
3 | Culm leaf sheath margins glabrous or one margin ciliate; oral setae absent or small | 4 |
– | Culm leaf sheath margins ciliate; oral setae 3–6 pairs | Gelidocalamus multifolius |
4 | Oral setae of culm leaves 1–2 pairs, small; branch sheath margins glabrous; branch sheaths with black spots | Gelidocalamus stellatus |
– | Oral setae of culm leaves none or several; branch sheath margins ciliate at one side, the other side glabrous or apically ciliate; branch sheaths without black spots | Gelidocalamus fengkaiensis |
5 | Culm leaf sheaths covered with appressed brown short hairs | 6 |
– | Culm leaf sheaths covered with white erect thin hairs | 8 |
6 | Culms up to 5m tall, more than 1cm in diam | Gelidocalamus tessellatus |
– | Culms less than 4m, less than 1cm in diam | 7 |
7 | Culm leaf sheaths with white villus, margins with cilia | Gelidocalamus monophyllus |
– | Culm leaf sheaths hairless, margins glabrous | Gelidocalamus xunwuensis |
8 | Culm leaf sheath margins densely ciliate, oral setae 1 pair, foliage leaves 1(–2) per ultimate branch, lateral veins 6–9 pairs | Gelidocalamus latifolius |
– | Culm leaf sheath margins hairless, oral setae 2–3 pairs, foliage leaves 1–3 per ultimate branch, lateral veins 4–6 pairs | Gelidocalamus annulatus |
Morphologically, although its inflorescence is not seen so far, G. zixingensis is undoubtedly a member of the genus Gelidocalamus, because it possesses all key characters of the genus, i.e., leptomorph rhizomes, several branches per node, typically a single foliage leaf on each ultimate branch, semelauctant inflorescence (
Previous studies indicated that leaf epidermal features were of taxonomic significance in Bambusoideae (
The tribe Arundinarieae was known for its complex phylogenetic relationships. Despite many previous attempts based on different datasets having been made, intractable problems, such as low resolution or heavily conflicting topologies, still arose (
We are grateful to Chun-Ling Long (Zhejiang Normal University), Ting Kong (Jiangxi Matou Mountain National Nature Reserve), Wei-Jian Li (Nanchang Business College, Jiangxi Agricultural University), Yu-Guang Liu (Shenzhen Institutes of Advanced Technology, Chinese Academy of Sciences) for their work in field surveys and sampling. This study was financially supported by the National Natural Science Foundation of China [31960335, 31260043] and Key R & D Planned Projects of Jiangxi Province [20192BBF60015].
Gelidocalamus zixingensis complete chloroplast genome sequences
Data type: Phylogenetic.