Monograph |
Corresponding author: Christopher S. Lobban ( clobban@guam.net ) Academic editor: Bing Liu
© 2022 Christopher S. Lobban, Matt P. Ashworth, Terance Camacho, Daryl W. Lam, Edward C. Theriot.
This is an open access article distributed under the terms of the Creative Commons Attribution License (CC BY 4.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
Citation:
Lobban CS, Ashworth MP, Camacho T, Lam DW, Theriot EC (2022) Revision of Ardissoneaceae (Bacillariophyta, Mediophyceae) from Micronesian populations, with descriptions of two new genera, Ardissoneopsis and Grunowago, and new species in Ardissonea, Synedrosphenia and Climacosphenia. PhytoKeys 208: 103-184. https://doi.org/10.3897/phytokeys.208.89913
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Ardissonea was resurrected from Synedra in 1986 and was included as a genus by Round, Crawford and Mann (“The Diatoms”) in its own Family and Order. They commented that there might be several genera involved since the type species of the genus possesses a double-walled structure and other taxa placed in Ardissonea have only a single-walled structure. Two other genera of “big sticks,” Toxarium and Climacosphenia, were placed in their own Families and Orders but share many characters with Ardissoneaceae, especially growth from a bifacial annulus. Eighteen taxa (11 new species) from Micronesia were compared with the literature and remnant material from Grunow’s Honduras Sargassum sample to address the concepts of Ardissonea and Ardissoneaceae. Phylogenetic and morphological analyses showed three clades within Ardissonea sensu lato: Ardissonea emend. for the double-walled taxa, Synedrosphenia emend. and Ardissoneopsis gen. nov. for single-walled taxa. New species include Ardissonea densistriata sp. nov.; Synedrosphenia bikarensis sp. nov., S. licmophoropsis sp. nov., S. parva sp. nov., and S. recta sp. nov.; Ardissoneopsis fulgicans sp. nov., A. appressata sp. nov., and A. gracilis sp. nov. Transfers include Synedrosphenia crystallina comb. nov. and S. fulgens comb. nov. Synedra undosa, seen for the first time in SEM in Grunow’s material, is transferred to Ardissoneopsis undosa comb. nov. Three more genera have similar structure: Toxarium, Climacosphenia and Grunowago gen. nov., erected for Synedra bacillaris and a lanceolate species, G. pacifica sp. nov. Morphological characters of Toxarium in our region support separation of Toxarium hennedyanum and T. undulatum and suggest additional species here and elsewhere. Climacosphenia moniligera was not found but we clarify its characters based on the literature and distinguish C. soulonalis sp. nov. from it. Climacosphenia elongata and a very long, slender C. elegantissima sp. nov., previously identified as C. elongata, were present along with C. scimiter. Morphological and molecular phylogenetics strongly suggested that all these genera belong in one family and we propose to include them in the Ardissoneacae and to reinstate the Order Ardissoneales Round.
Ardissoneales, biodiversity, coral reefs, Grunow, Mediophyceae, systematics, Toxariales, Western Pacific
Bilaterally symmetrical, stick-like diatoms, 300–1300 µm long, are common and sometimes abundant epiphytes on seaweeds of coral reefs. Some have bilateral growth of the valve (“pennate” diatoms) and are in the Class Fragilariophyceae, including Stricosus Sabir & E.C. Theriot, 2018 and longer species of Hyalosynedra D.M. Williams & F.E. Round, 1986 (
Each genus in the Toxariales has a confused taxonomic history that has not yet been addressed with electron microscopy and several issues need to be resolved. The genus Ardissonea, subsumed as a subgenus of Synedra Ehrenberg, 1830 and declared by
The genera Toxarium and Climacosphenia differ from the others in different ways. Climacosphenia was formerly classified alongside Licmophora, while Toxarium was in Synedra (
Finally, one seemingly less similar taxon that occurs among Ardissonea, Toxarium and Climacosphenia spp. in our flora has been reported as Synedra bacillaris (Grunow) Hustedt, 1932 (= Synedra crystallina var. bacillaris Grunow, 1880) (
The initial objective of this study was to describe several new species of Ardissonea, but in our morphological study for taxonomy and floristics we were led to address the systematics of the whole group. We here present descriptions of the taxa in Micronesia, including new genera and new species, plus some related species from
Samples from our extensive collection of benthic diatoms from Micronesian coral reef habitats, preserved and prepared using the protocols standard in the U. Guam diatoms laboratory (
Country | Entity (Island) | Municipality (“State”) | Locality name | Locality code | GPS coordinates |
---|---|---|---|---|---|
United States of America | Guam | Yona Municipality | UOG Marine Laboratory | GU7 | 13.428°N, 144.799°E |
United States of America | Guam | Inarajan Municipality | Saluglula Pools, Inarajan | GU21 | 13.271°N, 144.748°E |
United States of America | Guam | Hagatna Municipality | Agana Boat Basin | GU26 | 13.478°N, 144.749°E |
United States of America | Guam | Santa Rita Municipality | GabGab Reef | GU44 | 13.443°N, 144.643°E |
United States of America | Guam | Piti Municipality | Scuba (Outhouse) Beach | GU52 | 13.464°N, 144.656°E |
United States of America | Guam | Umatac Municipality | Nathan’s Dent | GU54 | 13.336°N, 144.641°E |
United States of America | Guam | Agat Municipality | “Pete’s Reef” | GU55 | 13.347°N, 144.639°E |
United States of America | Guam | Merizo Municipality | Achang mangroves | GU58 | 13.249°N, 144.697°E |
United States of America | Guam | Merizo Municipality | Cocos West @ MDA buoy | GU56 | 13.252°N, 144.648°E |
United States of America | Guam | Santa Rita Municipality | GabGab Reef II | GU66 | 13.444°N, 144.644°E |
United States of America | Guam | Santa Rita Municipality | Western Shoals, Apra Habor | GU68 | 13.451°N, 144.656°E |
United States of America | Guam | Agat Municipality | Agat Reef nr Coral Gardens | GU75 | 13.357°N, 144.645°E |
United States of America | Guam | Santa Rita Municipality | Vecky’s Reef | GU76 | 13.449°N, 144.625°E |
United States of America | CNMI | Saipan Municipality | American Memorial Park | SPN2022-1-4 | 15.218°N, 145.721°E |
Federated States of Micronesia | Yap | Weloy Municipality | Nimpal MPA reef | Y36 | 9.542°N, 138.084°E |
Federated States of Micronesia | Yap | Weloy Municipality | Nimpal MPA reef | Y37 | 9.542°N, 138.082°E |
Federated States of Micronesia | Yap | Tomil Municipality | Tagireeng Channel | Y39 | 9.562°N, 138.145°E |
Federated States of Micronesia | Yap | Tomil Municipality | Peelaek Corner | Y42 | 9.515°N, 138.179°E |
Federated States of Micronesia | Chuuk | Weno Municipality | Eastern Passage, Moch Islet | TK4, TK28 | 7.514°N, 151.967°E |
Republic of Marshall Islands | Majuro | Majuro Atoll Municipality | Mile 28 near Laura, outer reef | M1, M2 | 7.137°N, 171.038°E |
Republic of Marshall Islands | Jaluit | Jaluit Atoll Municipality | Kabbenbock Islet | J5 | 5.930°N, 169.636°E |
Republic of Marshall Islands | Bikar | none (uninhabited) | Within the lagoon | BA1 thru 11 | 12.223°N, 170.096°E |
Light microscopy was done on Nikon 80i microscopes with differential interference contrast, imaging with the Nikon DS-Fi1 camera system. Some SEM images were taken with a PhenomWorld G2Pro desktop SEM as in previous work, but many final images, including those using a eucentric (tilting) stage and all those of Toxarium and Climacosphenia, were made on a Thermo-Fisher Phenom XL SEM (NanoScience Instruments, Phoenix, AZ) after recoating stubs with gold using a Luxor Gold sputter-coater (NanoScience Instruments, Phoenix, AZ). The materials observed were valves or frustules on strewn slides and SEM stubs in the diatom collection of the University of Guam Herbarium (GUAM), linked to collection data by the sample number and are referenced here by that sample number. Cataloguing of selected, imaged specimens of individual specimens has begun, using the Specify™ software, but is only in the earliest stages, so that catalog numbers have not yet been assigned to the specimens studied, but the developing website is accessible via the Guam Ecosystems Collaboratorium for Corals and Oceans (GECCO) Biorepository Specify Portal at https://specifyportal.uog.edu.
Culture conditions for the strains sequenced and photographed in this study were dependent on where the strains were isolated. Strains isolated from Guam and Saudi Arabia were maintained in a Percival model I-36LL incubation chamber (Percival, Boone, Iowa, USA) at 27 °C under a 12:12 hr light:dark period. Strains isolated from Florida and North Carolina were maintained on a lab bench between 20–24 °C, illuminated by a north-facing window. DNA sequencing of these strains was conducted using the DNeasy Plant Minikit, adding a 45 s incubation in a Beadbeater (Biospec Products, Bartlesville, OK, USA) with 1.0 mm glass pellets for cell disruption. Three markers—the nuclear-encoded ribosomal SSU and chloroplast-encoded rbcL and psbC—were amplified by PCR, purified and sequenced following the protocols outlined in
Sequence data were added to a dataset of diatoms, with Bolidomonas pacifica Guillou & Chrétiennot-Dinet, 1999 used as an outgroup (see Suppl. material
The frustules in the taxa treated here appear either heteropolar or isopolar, even though most are attached to the substrate at one pole by mucilage pads or stalks. Heteropolarity may be evident in the shape of the valve (cuneate or clavate), and/or in a cuneate girdle view caused by tapering girdle bands and narrower mantle toward the basal pole. We coded polar morphology as isopolar if the shapes were essentially similar at opposite poles. We avoid the term ‘apices’ because it can be ambiguous, and refer instead to ‘poles’; in heteropolar species we distinguish the ‘basal pole’, i.e., attachment end, from the ‘apical pole’. In some species the valve mantle, especially at the poles, is “recurved as a lip or poorly developed pseudoseptum” (
We review the literature and present our observations on the taxa in the following groups, (1) those with double walls + pseudosepta, (2) those with single walls + pseudosepta, (3) those with single walls but without pseudosepta, (4) Synedra bacillaris, (5) Toxarium, and (6) Climacosphenia.
Table
Guam: GU44BH-5!, GU26A!, GU52R-2!. Federated States of Micronesia: Yap: Y39A!, Y42-1!. Marshall Islands: Jaluit Atoll: J5!; Bakir Atoll: BA2!.
Valves linear with broadly rounded poles, 201–300 µm long, 22–24 µm wide, striae 8–10 in 10 µm, isopolar in both valve and girdle view (Fig.
Micrographs of Ardissonea formosa A whole frustule, length 380 µm, girdle view in SEM, showing isopolarity (Guam: GU44BH-5) B, C light micrographs at two focal planes, apical part of valve showing internal foramina (B arrows), annulus and central costa (C arrowheads) (Jaluit: J5) D SEM of internal aspect showing inner wall with foramina and narrow apical pseudoseptum (arrow) (GU44BJ-2) E internal aspect of valve pole with inner wall missing, showing a central longitudinal costa (arrow) (Yap: Y42-1) F internal view of pole of valve with valvocopula, showing double wall with one central line of foramina, transverse and longitudinal costae showing through the interior wall, and the pores of the valvocopula asymmetrically deflected around the notch (arrow) (Y42-1) G broken frustule showing details of wall structure—inner and outer layers separated by costae, inner layer with foramina—in relation to valvocopula and copula (GU44BJ-4) H pole of frustule showing long fimbriae at tip of copula (arrow) (GU75A-4) I detail of frustule pole in girdle view, showing the three girdle bands with no pores in the external surfaces and the groove in the valvocopula apex (arrow) (GU44BH-5) J details of mid portion of frustule in girdle view, showing a line of pores on the edge of the copula (arrowhead) and on the pleura, and the fimbriate inner edge of the valvocopula (arrow) (GU52R-2). Abbreviations used on figures: VC = valvocopula; cop = copula; pl = pleura. Scale bars: 100 µm (A); 10 µm (B–C, I); 5 µm (D–H, J).
The biseriate striae described by
Differing from A. formosa in small, lanceolate valves with 16–17 striae in 10 µm and externally porate copula.
Valves lanceolate, weakly rostrate, 46–103 µm long, 7–10 µm wide, striae parallel, 16–17 in 10 µm (Fig.
Ardissonea densistriata sp. nov. A holotype from Bikar Atoll, BA1 (LM) B, C external views of valves in SEM; arrows on B point to location of annulus (B Y42-1, C BA-1) D, E external view of two ends of same frustule showing isopolarity; arrow on E points to apical notch in VC (J5) F, G internal views of valves with one and two middle lines of foramina, arrows showing asymmetrical pseudoseptum on valve in F and asymmetrical pole of the valvocopula in G; arrowheads point to longitudinal costae (BA1) H, I external views of frustules from Bikar and Jaluit, respectively, showing profile of pole of valvocopula in H and apical comb of fimbriae on copula in I (arrow). Scale bars: 10 µm (A–C); 5 µm (D, E); 2.5 µm (F–I).
(designated here). Specimen at 16.6 mm E and 11.5 mm S of the mark on slide 2911, deposited at ANSP accession # ANSP-GC20089. Fig.
Phycobank http://phycobank.org/103235.
Marshall Islands: Bikar Atoll, 12.223°N, 170.096°E. Filamentous seaweed sample from shallow subtidal farmer fish territory in the lagoon, precise location not recorded. Collection number BA1, October 2019. Andrew McInnis leg.
Federated States of Micronesia: Yap: Y42-1!, Y42-3!.
Densus + striatus (Latin) = densely striated, in comparison to congeners.
Given the small number of double-walled Ardissonea species, this species is easily distinguished by the small size, lanceolate shape and relatively high stria density. It is more readily confused in our flora with Grunowago pacifica sp. nov. (see below), but in LM the latter can be distinguished by the lack of an inner wall (indicated by absence of foramina) and presence of a longitudinal costa along the midline, in SEM by the extensive poration on the copula. To date this species has not been observed in Guam samples. A different lanceolate, double-walled Ardissonea was observed in samples from Chuuk and Jaluit, with stria density 9–12 µm, length 116–211 µm, but we do not have complete information from either population. These samples are similar in shape and stria density to a Red Sea species ‘Ardissonea AdnU041’ observed by Sabir et al. (unpublished: http://www.protistcentral.org/Taxa/get/taxa_id/586376 and Ashworth, personal communication). This unnamed species is 83–125 µm long and has no external poration on the girdle bands (as in A. formosa). The sequence data have been published as UTKSA0041, shown in our Fig.
Length µm | Width µm | Shape | Stria density in 10 µm | Valvocopula exterior pores | Copula exterior pores | Pleura | |
---|---|---|---|---|---|---|---|
A. robusta | 200–520 | 30–40 | Broadly linear-lanceolate | 7 | Unknown | Unknown | Unknown |
A. formosa | 200–700 | 15–25 | Linear | 9–10 | Absent | ± irregular abvalvar row | Narrow, continuous, porate |
A. pulcherrima | 240–750 | 18–28 | Linear, the cuneate poles somewhat inflated | 9 | Unknown | Unknown | Unknown |
A. densistriata sp. nov. | 46–103 | 7–10 | Lanceolate | 16–17 | Absent | Single abvalvar row | Continuous, porate |
Table
Valves 200–700 µm long, 8–20 µm wide, linear but slightly wider at the middle and poles; 11 striae in 10 µm but much closer in “transitional forms such as var. dalmatica” (
Guam: GU44Y-13!, GU44AV-8!, GU44BJ-4!, GU56A-2!. Federated States of Micronesia: Chuuk: TK4, TK28. Marshall Islands: M1!
Specimens from Guam and Chuuk 220–350 µm long, 11–16 µm wide, isopolar in both valve and girdle views, striae 16–19 in 10 µm, slightly offset on internal and external sides of annulus (Fig.
Ardissonea crystallina A, B external and internal views of valve poles from, respectively Majuro (M1) and Guam (GU44J-4), showing pseudoseptum (B arrow) C internal SEM view (60° tilt) of broken valve showing internal costae including longitudinal costa subtending the annulus (arrowhead) and continuous rim on valve (arrow) (Chuuk: TK4) D, E pole of frustule in girdle view and tilted to 45° to confirm identity; showing the asymmetrical gaps between the pseudoseptum and valvocopula (arrows) (GU75A-4) F, G polar portions of valvocopulae from advalvar side and abvalvar sides, respectively, arrow on F showing where pores along edge of pars interior move to the back of the gap, arrowhead on G showing that slits do not form an open comb (Chuuk: TK4) H polar view of pole with valvocopula showing the asymmetrical gaps (TK4) I, J poles of copulae from wild material (TK4) and culture (GU44AV-8), respectively, arrows indicating fused bases of fimbriae away from the pole. Scale bars: 10 µm (D, E, I); 5 µm (A–C, F–H, J).
Ardissonea crystallina cannot remain in Ardissonea sensu stricto and will be transferred in the Taxonomic Revisions section at the end of the paper.
Length µm | Greatest width µm | Shape | Stria density in 10 µm | Valvocopula exterior pores | Copula exterior pores | Pleura | |
S. baculus | 200–1000 | 13–27 | Linear | 10.5 | Unknown | Unknown | Unknown |
S. bikarensis sp. nov. | 214–277 | 12–14 | Spathulate | 21 | 3 rows reducing to 1; very coarse fimbriae | Irregular lines of slits (rimae) | Separate porate polar caps, apical larger |
S. crystallina | 200–700 | 8–20 | Linear | 11 | 2–3 rows | Ca. 5 rows | Probably continuous |
[220–350] | [11–16] | [16–19] | [3–4 rows] | [10 rows] | |||
S. giennensis | 195 | 35 | Clavate, widest ¼ from apical pole | 12 | Unknown | Unknown | Unknown |
S. gomphonema | 250–475 | 27–36 | Clavate, subrostrate apical pole | 12 basal / 14 apical | 4 rows decreasing to 2 near basal pole | Decussate striae, forming fimbriae on abvalvar margin | Apical cap |
[13–14/14–16] † | |||||||
S. fulgens‡ | 330–346 | 9.5–11.5 | Linear, center slightly inflated | 15–16 | Numerous rows | Unknown | Unknown |
S. licmophoropsis sp. nov. | 600–735 | 27 | Cuneate | 19 | 5 rows reducing to 2 | 10 rows decreasing to 5 | Narrow, continuous |
S. parva sp. nov. | 196–250 | 18 | Clavate | 16 basal, 18–20 apical | 3 rows decreasing to 1 | 7 rows decreasing to 3 | Polar caps porate; apical cap large, fimbriate |
S. recta sp. nov. | 406–430 | 13–16 | Linear | 16–18 | None | Slits | Small polar caps joined by narrow perforated band, not fimbriate? |
The valve shape as shown by both
Guam GU44Y-13!, GU44BD-4!, GU44BH-5!, GU 44BJ-2!, GU44BJ-4!. Federated States of Micronesia: Chuuk: TK28!; Yap: Y42-1!. Marshall Islands: Jaluit, J5!.
Frustules heteropolar, cuneate in both valve and girdle view, numerous small, oblong plastids (Fig.
Synedrosphenia gomphonema A live specimen in valve view showing heteropolar cell shape and plastids (GU44BJ-4) B apical portion of cleaned valve in LM showing change in stria orientation where cell narrows (GU44BD-4) C, D recently divided frustule in girdle view with details of basal and apical poles, respectively, showing heteropolarity; black arrow indicates slit formation on the copula (GU44BJ-4) E, F valvar view of frustule at 0° and 60° tilt, respectively, arrows on E showing location of annulus, labels on F naming the girdle bands (abbreviations as before) G–I apical and basal portions of valve, internal view tilted 60°, showing pseudosepta at poles (H, I arrows) and transverse and longitudinal costae (TK4); inset (H) shows tip of same valve at 0° tilt with lack of costae between the last few striae but continuation of annulus J, K basal portions of a broken, recently divided frustule from Chuuk, viewed at 0° and 60° tilt, respectively, valves and girdle bands of one daughter cell with one valve of other daughter on top; arrow shows the notch between valve and valvocopula (TK4). Scale bars: 25 µm (A); 10 µm (B–G, I); 5 µm (H, J).
Synedrosphenia gomphonema cont. A apical pole of frustule in polar view tilted 60°, showing the valvocopula and copula of the hypocingulum (HVC and Hcop) largely hidden under the epicingulum bands (EVC and Ecop); the pleurae are missing and in the space where they were the tips of the newly formed valves are visible (long arrows). Short white arrows point to the apical notches slightly off-center in opposite directions; black arrow shows some slit formation in the copula (GU44BJ-4) B–E valvocopula with apical pole in advalvar view (B) showing recurved pars interior at the tip, abvalvar view (C), basal pole (D) and middle (E), all showing fimbriae (B, D, E from same specimen in GU44BI-4, C from TK4) F, G copula middle and apical pole, respectively, external view, showing fimbriae developing on the abvalvar edge of the pars exterior (arrow) (TK4). Scale bars: 10 µm (A, E, F, G); 5 µm (B–D).
A frustule of Sceptroneis cuneata in remnants of Grunow 639 (Fig.
Specimens of Sceptroneis cuneata from Grunow’s Honduras sample A–C whole frustule at 0° tilt and details of basal pole and apical poles, respectively, showing internal costae and the copula; arrows point to long fimbriae overlapping valvocopula at both poles D, E same specimen, tilt = 60°, details of apical and basal poles, respectively, showing copula, including shallow cut-away matching smaller pleura (arrow on D), hyaline abvalvar margin of copula (black arrow on D), and reduced poration near basal pole (arrow on E) F apical part of valve in external view G valvocopula associated with same specimen. Scale bars: 50 µm (A); 10 µm (B–F); 5 µm (G).
There are too many differences from Grunow’s specimens to identify our species as Sceptroneis cuneata. We also cannot confirm whether our specimens match Synedrosphenia gomphonema without SEM of authentic specimens. The taxonomy of Synedrosphenia is convoluted. As explained by
“Originally described (and validly published) as a subgenus of Synedra: Synedra subgenus Synedrosphenia H. Peragallo in H. and M. Peragallo 1900 [
Valve spathulate, heteropolar, differing from S. parva and S. gomphonema in valve shape and in the fimbriate pars exterior of the copula.
Cells heteropolar, probably attached by basal pole to seaweeds. Valves spathulate, 214–277 µm long with linear, wider apical portion 12–14 µm wide, narrowing abruptly about halfway down the valve and then more gradually to 6 µm near the basal pole, which is weakly inflated to 7 µm (Fig.
Synedrosphenia bikarensis sp. nov. (all from Bikar sample BA5) A–C holotype whole valve, basal and apical portions, respectively (LM) D–F external SEM views of apical, middle and basal portions, respectively, of a frustule, showing valve structure. Oval in D highlights area where break in striae across the annulus can be seen, even though the annulus is not readily visible G, H internal views of apical pole with pseudoseptum (arrow) and middle portion (H) showing transverse costae and the lack of a longitudinal costa under the annulus I, J frustule in girdle view, apical and basal portions, respectively, showing heteropolarity and girdle bands of the epicingulum. Arrows mark the notches visible on the hypovalvocopula at the apical pole and epivalvocopula at the basal pole, indicating the asymmetry. Scale bars: 25 µm (A); 10 µm (B, C, H); 5 µm (D–G, I, J).
Girdle bands: Cingulum comprising two large, closed bands and a large apical cap (pleura) (Figs
Synedrosphenia bikarensis, cont. A–C valvocopula: apical portion in advalvar view (A) with asymmetrical notch at apical pole (arrow), middle portion (B) with long sturdy fimbriae (ext = external surface, int = internal surface), and basal portion in girdle view (C) D, E internal views of apical and basal poles, respectively, of same valve with valvocopula, showing opposite asymmetry of the notches (arrows) F basal portion of valve with attached girdle bands, showing how the copula fimbriae fit over the valvocopula at poles (arrow) G apical portion of copula showing poration. Scale bars: 5 µm.
(designated here). Specimen at 14.9 mm E and 9.6 mm S of the mark on slide 2920, deposited at ANSP, accession # ANSP-GC20090. Fig.
Phycobank http://phycobank.org/103236.
Bikar Atoll, Marshall Islands, 12.223°N, 170.096°E, on seaweed filaments attached to coral from a farmer fish territory in the lagoon. Collection number BA-5, October 2019. Andrew McInnis leg.
Named for Bikar Atoll, Republic of the Marshall Islands, where it was collected.
The apparent absence of a bifacial annulus is unique among the Synedrosphenia species described here, where there is usually at least a hyaline line visible on the valve face or at the face-mantle margin. There is, however, a misalignment of striae evident in places along the valve–mantle junction (Fig.
Extremely long heteropolar cells, differing from other species in the cuneate shape in valve and girdle views.
Frustules heteropolar, tapering uniformly in both valve and girdle view (Figs
Synedrosphenia licmophoropsis sp. nov. A apical pole of living cell showing plastids and annulus (arrow) (GU44AV-8) B–D holotype valve from GU55B-4 in LM: apical and basal portions showing annulus and entire valve E, F external view of valve, SEM: basal and apical poles, respectively, same scale (GU44Y-13) G, H apical and basal poles, respectively, valve in internal view, SEM, showing longitudinal and transverse costae and pseudosepta (arrows) (GU56A-2). Scale bars: 50 µm (D); 10 µm (A–C, E–G); 5 µm (H).
Synedrosphenia licmophoropsis sp. nov., girdle bands A, B frustule in girdle view with thecal elements labeled, respectively on the apical part and the basal pole of the same cell also showing the asymmetrical apical notches in the valvocopula (arrows) (GU55D-3) C small portion near middle of frustule where pleura (pl) is exposed (GU76B-2) D, E basal pole of valvocopulae at 0° tilt with opposite valve in the background and tilted to show complex shape of the pars interior, arrowhead pointing toward notch (GU76B-2 and TK4, respectively) F portions of valvocopula and copula showing fimbriate inner edges (GU55D-3) G valvocopula, apical pole in abvalvar aspect with attached valve, showing elongated pores on inner edge (arrow) (GU44BJ-2) H apical portion of copula showing very long fimbriae at the tip (arrow) (GU55D-3) I relationship between first two girdle bands at basal pole, the long fimbriae of the copula overlapping the valvocopula (GU76B-2). Scale bars: 10 µm (A, B, F, H); 5 µm (C–E, G, I).
(designated here). Specimen at 13.0 mm E and 5.0 mm S of the mark on slide 455, deposited at ANSP accession # ANSP-GC20086. Fig.
Phycobank http://phycobank.org/103237.
“Pete’s Reef” (commercial dive site), Agat Bay, 13.347°N, 144.639°E. Epiphytic on Halimeda at 10 m, collection number GU55B-4, 13 Dec. 2008. C. Lobban and M. Schefter, leg.
Guam: GU44Y-13!, GU44AV-8!, GU54A-B!, GU56A-2!, GU66B-6!, GU76B-2. Federated States of Micronesia: Yap: Y-37-8!; Marshall Islands: Bikar Atoll BA-5!.
Named for its resemblance to certain large Licmophora spp., especially L. attenuata Lobban, Tharngan and Ashworth.
Longer and more evenly tapered, apical pole broadly rounded, striae denser compared to S. gomphonema; valves appearing narrower than S. gomphonema because of the greater length, but the apical poles are equally wide.
Shorter and narrower than S. gomphonema and more finely striated. Girdle bands distinctive: copula with very long internal fimbriae at poles, pleura a large apical cap.
Frustules heteropolar in valve and girdle views (Fig.
Synedrosphenia parva sp. nov. A holotype from Guam in LM, arrow indicates annulus near valve face–mantle junction (GU75A-4) B, C valve in external view (SEM), basal and apical poles, respectively, arrow indicates annulus (GU75A-4) D, E internal views of apical and basal poles, respectively, arrows indicate pseudoseptum (J5) F, G frustule in girdle view, apical and basal portions, respectively, showing the girdle bands including the large apical cap of the pleura, smaller at the basal pole and perhaps not connected (arrowhead in G indicates the apparent end of the pleura); arrows on F, G point to polar notches (GU75A-4). Scale bars: 25 µm (A); 10 µm (B, C, F, G); 5 µm (D, E).
Synedrosphenia parva sp. nov., cont. All GU75A-4 A, B valvocopula showing apical internal side from abvalvar position, and portion of middle from advalvar side, respectively, showing row of pores along base of pars interior and fimbriae C internal view of apical pole with valvocopula in situ and the copula, broken in the middle, covering the valvocopula around the apical pole and left side D basal pole of same specimen, again showing the long fimbriae overlapping the valvocopula E, F frustules tilted to show polar (apical) architecture of, respectively a recently divided cell, where the pleura is in place between the copulae of the two cingula, and a non-dividing cell G detail of a pleura loosened from its position and showing some of the fimbriae (still tucked under the copula at top of image). Scale bars: 10 µm (A); 5 µm (B, D–F); 2.5 µm (C, D, G).
(designated here). Specimen at 15.3 mm E and 12.7 mm S of the mark on slide 2326, deposited at ANSP accession # ANSP-GC20088. Fig.
Phycobank http://phycobank.org/103238.
Agat Reef behind Anae I., Agat Bay, 13.357°N, 144.645°E. Epiphytic on seaweed at low tide line, collection number GU75A-4, 6 May 2017. C. Lobban and M. Schefter leg.
F.S.M.: Chuuk, TK4!; Marshall Islands. Jaluit Atoll, J5!.
Named for its small size within the genus.
Long, straight valves with isopolar, bluntly rounded poles, differing from Synedrosphenia (Ardissonea) crystallina in the marginal annulus, shape of pole, and poration on girdle bands, and from Synedrosphenia (Ardissonea) fulgens in the notch and poration of the valvocopula.
Valves linear, slightly wider in the middle, isopolar with bluntly rounded poles, length 406–430 µm, width 13–16 µm, striae parallel except at pole, 16–18 in 10 µm, areolae slightly elongated in apical axis (Fig.
Synedrosphenia recta sp. nov. Chuuk TK28 except as noted A, C holotype and details of pole at two focal planes, showing valve face and valvocopula B, D–F specimen in SEM with details of pole at 0° tilt (D), arrows showing position of annulus, and 60° tilted views of central portion (E) showing copula and opposite pole (F) showing copula and valvocopula with apical notch (arrow) G, H internal view of a pole with valve and valvocopula at 60° tilt, showing apical notch (arrow), and at 0° tilt, showing apical area without transapical costae; arrows show inferred position of annulus as in D and absence of longitudinal costae I polar view of valve with valvocopula, showing apical notch J broken valve showing continuous transverse costae (arrow) and pores on pars interior of valvocopula (arrowheads) K specimen from Guam (GU76B-4), showing fragments of very narrow pleura (pl, arrows) L specimen from Jaluit (J5), pole of valve without valvocopula, showing continuous rim and absence of longitudinal costae; two-way arrow marks position of annulus, as in D, H. Scale bars: 50 µm (A, B); 10 µm (C); 5 µm (D–L).
(designated here). Specimen at 14.3 mm E and 5.7 mm S of the larger mark on slide 154, deposited at ANSP accession # ANSP-GC20113. Fig.
Phycobank http://phycobank.org/103239.
Federated States of Micronesia: Chuuk: Moch Islet at Eastern Passage of the barrier reef (7°30'50.7"N, 151°57'59.8"E), epiphytic on filamentous seaweeds in farmer fish territory, collection number TK28, 30 May 1991. C.S. Lobban and M. Schefter leg.
Guam: GU76B-2!. Marshall Islands: Jaluit, J5!.
L. rectus, straight. Named for its parallel sides and isopolarity.
This species resembles two former Ardissonea species which we are separating into different genera. The complex polar architecture places it in Synedrosphenia, within which it is differentiated from S. (Ardissonea) crystallina by the marginal annulus, bluntly rounded poles, plain valvocopula and slits on the copula. The shape of the poles and the marginal annulus resemble Ardissoneopsis fulgicans, and in LM of Chuuk samples S. recta was distinguishable only by length, the A. fulgicans specimens being only 300 µm long. We first noticed it when we found a specimen, apparently of A. fulgicans, with a valvocopula pole evidently of the Synedrosphenia type (Fig.
Specimens from Bikar Atoll (not illustrated) with longer (to 583 µm) but narrower (7 µm) valves, weakly inflated at the poles and in the middle, were structurally indistinguishable from the Chuuk specimens on which the species is defined, including the lack of longitudinal costae. Without further evidence, we cannot decide whether to assign this to a formal varietal status, describe it as a separate species, or leave it within the scope of S. recta. We mention it here to underline the point that the present study does not exhaust the biodiversity of these genera in Micronesia.
For the reasons given below for separating single-walled Ardissonea taxa, it cannot remain in Ardissonea sensu stricto. If this species is confirmed to lack the apical notch, its pseudoseptum and sculpted valvocopula are sufficiently strong characters to place it in Synedrosphenia; it certainly does not belong in Ardissoneopsis, proposed below, which lacks those characters, and we therefore must describe our fulgens-like taxa as new species and propose a new combination of Synedrosphenia fulgens for Greville’s species.
Table
Ardissonea fulgens
(Greville) Grunow sensu
Differing from congeners in the straight outline, only weakly inflated at the center.
Valves 205–320 µm long, 9–15 µm wide, usually slightly widened in the middle and bluntly rounded at poles (Fig.
Ardissoneopsis fulgicans sp. nov. A, B valve in LM showing shape and striation (TK28) C pole of frustule from acid cleaned material in SEM, showing annulus (double-headed arrow) (J5) D, E poles of frustules in whole mounts, attached at opposite ends, showing girdle bands and apical spines (GU7R) F, G internal views of valve pole and central portion, showing the absence of pseudoseptum at pole and presence of longitudinal costae (arrows) (GU44N-A) H pole of valve with valvocopula, showing start of transverse costae (arrow) (contrast with pole of Synedrosphenia recta Fig.
(designated here). Slide 449, multiple specimens present. Slide deposited at ANSP, accession # ANSP-GC20111. Representative specimen published in
Phycobank http://phycobank.org/103241.
Guam: Apra Harbor, GabGab reef. 13.443°N, 144.643°E, sparse filamentous algal turf in farmer fish territory (Plectroglyphidodon lacrymans), depth ca. 5 m., collection number GU44Y-13, 10 May 2009. C. Lobban, M. Schefter leg.
Guam: GU7R!, GU44Z-15!, GU44L!, GU44N-A!, GU44AC-3!, GU44BJ-4! (inter alia); Federated States of Micronesia: Chuuk: TK28!; Marshall Islands: Jaluit J5!.
Adjective (Latin), fulgens (shiny) + -icans (“indicates... resemblance sometimes so close as to be almost identical” –
In our region, this species is hard to positively identify in LM from the new species Synedrosphenia recta described above, and some other species so far only glimpsed but differs in (1) having simple apical structure unlike Synedrosphenia spp.; (2) the presence of two or more rows of pores on the valvocopula exterior.
Length µm | Width µm | Shape | Stria density in 10 µm | Valvocopula exterior pores | Copula exterior pores | Pleura | |
---|---|---|---|---|---|---|---|
A. appressata sp. nov. | 400–1000 | 10–15 | Linear, center and poles inflated | 13–14 | 2 rows, decreasing to 1 | 6 rows, decreasing to 4 | Very narrow; apical caps? |
[560–900] | [9–12] | [18–19] | |||||
A. fulgicans sp. nov. | 205–320 | 9–15 | Linear, center slightly inflated | 17–19 | 4 rows, decreasing to 2 | 4–5 rows | Very narrow; apical caps? |
A. gracilis sp. nov. | 217–431 | 5–7 | Linear, undulate, center ± inflated | 10–12 | 4 rows, decreasing to 1 near basal pole, but increasing at both poles | Ca. 8 rows decreasing to 2 | Narrow.; continuous? |
A. undosa | To 850 | 10–11 | Linear, undulate, center and poles inflated | 19–22 | Unknown | Unknown | Unknown |
Ardissonea fulgens var. gigantea (Lobarzewsky) Rabenhorst sensu
Differentiated from congeners in the straight valve with inflated center and apices, and valve-appressed colony formation.
Cells valve-appressed to form flat colonies from sturdy mucilage pads, cells toward the outside increasingly curved in the apical axis (Fig.
Ardissoneopsis appressata sp. nov. A, B flabellate colony and detail showing hemispherical nuclei surrounded by plastids and appressed to girdle faces; arrows on B show two of the many walls between cells (GU68H-1) C middle of colony in oblique view, showing inflation where nuclei are located D base of colony, showing parts of six frustules including pleura (pl, arrow) (GU44AP-2) E–G half valve from Yap, acid cleaned, with details of central and polar portions showing shape and stria density (Y42-1). Scale bars: 100 µm (A); 50 µm (E); 25 µm (B); 10 µm (C, F, G).
Ardissoneopsis appressata sp. nov., cont. GU44BJ-4 except as noted A girdle view of part of colony showing cells joined valve to valve, and the pattern of pores in valvocopula (VC) and copula (cop) (GU44AE-2) B, C valve pole in external and internal view, respectively showing tip of annulus (arrows) D portion of copula showing fimbriae E portion of valve near center: arrow points along longitudinal thickening below annulus and arrowhead indicates narrowing of transverse costae at margin F portion of frustule in narrow part, showing internal and external aspects and portions of the fimbriate valvocopulae (GU44T-1). Scale bars: 5 µm (A–C, E, F); 2 µm (D).
(designated here). Slide 449, multiple specimens present. Slide deposited at ANSP accession # ANSP-GC20111. Representative specimen published in
Phycobank http://phycobank.org/103242.
Guam: Apra Harbor, GabGab reef. 13.443°N, 144.643°E, sparse filamentous algal turf in farmer fish territory (Plectroglyphidodon lacrymans), depth ca. 5 m., collection number GU44Y-13, 10 May 2009. C. Lobban and M. Schefter leg.
Guam: GU68H-1!, GU44Z-15!, GU44T-1!, GU44BJ-4!, inter alia. Federated States of Micronesia: Yap: Y42-1!; Chuuk: TK28!.
Adjective (L.) appressus, appressed, with reference to the colony formation.
We previously (
However, drawings of Synedra gigantea Lobarzewsky (1840, p. 276, pl. 6, fig. a–c) show a highly elongated diatom occurring in valve-appressed clusters, somewhat similar to those seen in Guam, but not showing any bulge in the middle and being apparently very flexible; as far as one can tell, the frustule is uniformly linear in both views, but he stated that the side (i.e., valve) view is 3–4 times narrower and with a wavy outline. This does not well accord with valve views of Ardissonea fulgens var. gigantea, which has never been depicted as wavy but has been shown with a strong central inflation. Lobarzewsky’s drawings look more like Licmophora flucticulata Lobban, Schefter and Ruck (2011), which is wavy and very narrow and occurs in valve-appressed clusters, except that the clusters of that species in girdle view are very obviously tapered. The descriptions of this taxon were carried forward into
Very long, to 850 µm, slender, inflated at the center and poles, undulate in between, striae 19 in 10 µm (20–22 according to
Remnant material of Grunow 839-4611 [W catalog # W0127010, Acquisition # W-1901-0004611]. Not found in Micronesian samples.
We have not encountered this in the Guam flora but found several fragments in Grunow’s Honduras gathering that showed internal and external structure, confirming the similarity of structure to the two aforementioned Ardissoneopsis spp. A fragment including the central inflation and one pole suggests a total length of ca. 690 µm (Fig.
Synedra undosa from Grunow’s Honduras material A internal view of half valve, total length would have been ca. 690 µm B external view of fragment of frustule including the central inflation C external view of valve fragment with pole D external view of valve fragment near central area showing the strong undulation E detail of external pole showing annulus (double-headed arrow) and spines F–H internal views of central, near central (cf. D), and polar portions of valve, respectively, showing longitudinal costae (arrows) and transverse costae; transverse costae developing gradually toward left in H. I girdle bands, showing fimbriate valvocopula and copula with glimpses of interior costate surface of valve. Scale bars: 100 µm (A); 15 µm (B, C); 10 µm (D–I).
According to AlgaeBase (Miranda in Guiry and Guiry 2020), S. undosa is currently referred to as Toxarium undosum (Grunow) De Toni, 1892, which De Toni recognized as distinct from T. undulatum. We have not found more recent mention of this species, but it clearly cannot remain in Toxarium.
Differing from A. fulgicans in valves being more slender, slightly wavy outline, lower stria density, and markedly heteropolar frustule in girdle view and from A. undosa by lack of central inflation.
Frustules cuneate in girdle view (Fig.
Ardissoneopsis gracilis sp. nov. (GU44BJ-4, except B TK28) A–C three specimens to scale in LM to show size range: valves from Guam (A) and Chuuk (B), frustule from Guam in girdle view (C) showing heteropolarity D frustule in SEM tilted 60°, showing both valve and girdle faces E, F pole and mid-section of holotype G–K external views of valve in SEM with other species adjacent for comparison (GU44BJ-4): index image (G) with locations of details marked, apical pole (H) (shown by depth of mantle), compare stria density with Ardissoneopsis appressata (A. g.); top half of center (I), offset areolae in striae within the oval suggest location of annulus; narrow portion below center (J), compare with scattered areolae in adjacent Toxarium undulatum (T. u.); basal pole (K), note spines on both poles L, M internal aspect near middle and at the apical pole, showing lack of costae N, O girdle view of frustule apical and basal poles, showing taper in mantle and girdle bands P possible piece of pleura (pl?) with fimbriae Q, R fimbriate edges of valvocopula and copula, respectively. Scale bars: 50 µm (A–D, G); 10 µm (E, F, H–K); 5 µm (L–R).
(designated here). Specimen at 11.0 mm E, 2.5 mm S of the mark on slide 1831, deposited at ANSP accession # ANSP-GC20087. Fig.
Phycobank http://phycobank.org/103243.
Guam: Apra Harbor: GabGab reef, 13.443°N, 144.643°E, sparse filamentous algal turf on farmer fish territory (Plectroglyphidodon lacrymans), associated with A. gigantea and Toxarium undulatum, depth ca. 8 m., collection number GU44BJ-4, 8 Feb. 2015. C.S. Lobban and M. Schefter leg.
Guam: Apra Harbor: GU52P-7!, GU52AI-1!. Federated States of Micronesia: Chuuk: TK28!; Yap: Y36-2!. Marshall Islands: Majuro: M1!, Jaluit, J1!.
Adjective (Latin), slender.
Most similar to Ardissoneopsis fulgicans but differing in the wavy margin, width only half that of A. fulgicans, and in having only 10–12 striae vs. 19–20 in 10 µm. Its shape resembles some Toxarium hennedeyanum, which can sometimes be slightly wavy and only weakly inflated in the middle (e.g., Suppl. material
As described from LM (
We were able to find a few fragments of Synedra crystallina var. bacillaris Grunow in an SEM preparation from Grunow’s Honduras gathering (Fig.
Putative Synedra crystallina var. bacillaris from Grunow’s Honduras material A–C specimen in external view with valvocopula, identified by the length, the straight sides and blunt pole, stria density (11 in 10 µm), and row of pores in the exterior of the valvocopula (arrows); small spines on apex (arrowheads on B) D fragment of valve, interior view, showing central longitudinal costa and transverse costae E–G fragment of frustule showing valvocopula and copula G showing transverse costae (arrow) and absence of inner wall, arrowhead shows additional pores on valvocopula pole. Scale bars: 25 µm (A, E); 10 µm (B–D, F); 5 µm (G).
Specimens provisionally identified as S. bacillaris were found in samples from across Micronesia but there was a range of stria densities and dimensions. All had oval areolae and many had spines. However, there were few fitting the literature description, even overlooking the shape of the areolae, i.e., those with linear valves, blunt poles and 8–9 striae in 10 µm. Those in Guam were mostly among populations of lanceolate specimens and probably part of them (see next taxon). The small, circular areolae shown by
Differing from Grunowago (Synedra) bacillaris in width and lanceolate outline of valve.
Valves lanceolate, often slightly rostrate, 194–341 µm long, 11–16 µm wide, striae 9–10 in 10 µm (Fig.
Grunowago pacifica sp. nov. A–D LM of specimens from GU44BJ-4 (A–C) and GU44Z-15 (D) D, E holotype specimen F–H frustule in girdle view, showing isopolar frustule wider in the middle and three girdle bands (GU44BJ-4) I external view of pole and advalvar surface of valvocopula, the latter showing a short row of small pores on the apical part of the pars interior (arrowhead) and the crenulated edge of the pars interior (arrow) J internal view of pole and abvalvar surface of valvocopula. Scale bars: 50 µm (A–D, F); 10 µm (E, G–J).
Grunowago pacifica sp. nov., cont., all GU44BJ-4, except A = SPN2022-1-4 A valve apex showing continuous rim, broken away at lower right, not expanded into a pseudoseptum B frustule at 40° tilt, showing fimbriate inner margin of copula on the hypotheca (top) and line of pores on pars interior (arrow) C valvocopula, showing internal and external aspects, the pars exterior pores (arrow) separated by ridges on the pars interior, and the presence of pores on the pars interior at the pole (arrowhead) D frustule in girdle view with fimbriate pars interior of pleura exposed (arrow) E frustule in polar view tilted 60°, showing girdle bands. Scale bars: 10 µm (A–D); 5 µm (E).
(designated here). Specimen at 18.3 mm E and 6.4 mm S of the mark on slide 146, deposited at ANSP accession # ANSP-GC20085. Fig.
Phycobank http://phycobank.org/103245.
GabGab reef, Apra Harbor, Guam, 13.443°N, 144.643°E, ca. 1 m depth, collection number GU44Z-15, 20 June 2009. C.S. Lobban and M. Schefter leg. Additional slides from this sample have previously been deposited at California Academy of Sciences (CAS) for other species holotypes, but specimens of G. pacifica are not marked. Slides include CAS accession/slide numbers: 627386/223007 (Perideraion spp.), 627383/223005 (Gato hyalinus); 627409/223023 (Astrosyne radiata); and 627396/223010 (Hanicella moenia).
Guam: GU44L-C!, GU44AI-5! (in culture), GU44AP-8!, GU44BH-5!.
Adjective (Latin) with reference to its presence in the Western Pacific Ocean.
Specimens that we (
Colonial on stout mucilage stalks. Long, narrow valves, usually straight, inflated at the poles and the middle, valve lengths ranging from 300 to >1000 µm (
Guam: GU21AK-11!, GU44AK-4!, GU44BJ-4!. Federated States of Micronesia: Chuuk, TK28!. Marshall Islands: Majuro: M1!; Jaluit: J5!; Bikar: BA2!; inter alia.
Valves 156–334 µm long, usually straight but sometimes curved, 7 µm wide at middle, 4–5 µm at poles, with a single row of areolae on the shallow mantle (Fig.
Toxarium hennedyanum, all from GU44BJ-4 except C GU21AK-11, and I, K culture from GU44AK-4 A LM of valve with typical pattern in central area; 9 stria in 10 µm B SEM of a valve from same sample, 12 striae in 10 µm, with reduced central area C mucilaginous stalks with clusters of cells D internal central area, showing lack of costae E, F internal pole of valve showing asymmetrical pseudoseptum (arrow) and valve with valvocopula showing similar asymmetry (arrow) G pole of frustule in girdle view showing apical groove (arrow) on valvocopula and fimbriae partially exposed on copula H pole of frustule in girdle view showing apical notch (arrow) and the pleura (pl); note single row of areolae on mantle (*) I pole of valvocopula in girdle view, fimbriae absent from the tip J narrow portion of valve showing structure of copula (compare with Fig.
Toxarium undulatum, the generitype, was said to differ only in the wavy outline of the valve (
Guam: GU44X-2!, GU44Z-15!, GU44BJ-4!, inter alia; Federated States of Micronesia: Chuuk, TK28!; Yap, Y36-2!, Y42-3!. Marshall Islands: Majuro, M1!, Jaluit, J5!
Valves straight or commonly curved overall, strongly sinusoidal along the narrow part, the oval central portion with a wavy outline, apical portions straight sided (Fig.
Toxarium undulatum (all from Guam, GU44BJ-4) A, B entire valves in LM and SEM, respectively, showing prominent undulation C, D central expanded portion external and internal views, respectively, the latter showing costae E pole, internal view showing asymmetrical pseudoseptum (arrow) F internal and external aspects of valve in the narrow part G valvocopula lying inside narrow part of valve H, I portion of frustules in girdle view, showing multiple rows of pores on mantle, valvocopula with apical notch (arrow), and copula with pores continuing around the pole (arrowhead) J detail of copula, for comparison with Fig.
We also documented T. undulatum in Grunow’s Honduras sample (Fig.
Toxarium undulatum from Grunow’s Honduras material A, B entire valve, 700 µm long, and detail of central portion, showing long-wavelength undulations C portion with the central inflation, showing mantle depth, internal costae, valvocopula and copula (stria density 14 in 10 µm) D frustule in girdle view, showing vertical wave in rows of areolae with inserted arcs (arrows); notice also the different depths of the two mantles (stria density 17 in 10 µm) E portion of valve with copula and valvocopula F, G valvocopula pole, abvalvar and advalvar surfaces, respectively, showing series of arched slits (compare with Fig.
The specimens from Grunow’s Honduras material are near the length (“about 35m” = 890 µm; see
In the Micronesian samples, depths of the mantle, and structure of the copula were different in the two species, so we can assert that the specimens shown here for T. hennedyanum and T. undulatum are different species. The large genetic variation in Toxarium materials we have sequenced (Fig.
The Toxarium spp. specimens shown here from sample GU44BJ-4 were in a community with the new species Ardissoneopsis gracilis (see above), which has a slightly undulate outline but is distinguished from T. undulatum by the cuneate girdle view, regular striae across the valve face, apical spines, and the decussate pattern of pores on the girdle bands (Fig.
Table
C. elongata has been described (e.g., by
Comparison of Climacosphenia species from literature and present observations.
Valve length, µm | Width near basal pole, µm | Shape | Valvocopula width near apical pole†, µm | Annulus width near apical pole†, µm | Stria density in 10 µm | Craticular bars | |
---|---|---|---|---|---|---|---|
C. elegantissima | 700–1305 | 10 | Spathulate | 22–24 | 8 | 18–21 basal, 27–28 apical | Narrow throughout, complex unions in stem often double |
C. elongata ‡ (literature) | 325–525 | – | Clavate | – | – | 18–21 basal, 27–30 apical | ± Narrow throughout, complex unions in stem |
C. elongata (this study) | 278–516 | 8–9 | Clavate | 30–31 | 14–18 | 22 basal, 28 apical | ± Narrow throughout, complex unions in lower stem |
C. moniligera ‡ (literature) | 200–700 | 10 | Gradual taper | 15–40 | – | 16–17 basal, 19–20 apical | Wide throughout; complex unions ?throughout |
C. scimiter | 390–612 | 9 | Curved | 25–26 | 7–10 | 21 basal, 29 apical | Narrow throughout, complex unions absent |
C. soulonalis | 390–530 | 10–12 | Gradual taper | 29–35 | 15 | 18–20 basal, 28–29 apical | Narrow throughout, complex unions only in basal 1–3 bars |
Guam: GU44Y-13!, GU44U-1B!, GU44BM-4!, GU44BM-7!, GU52X-1!. Federated States of Micronesia: Chuuk, TK4!
Valve clavate, apical part gradually tapering to a narrow stem nearly half the total length of 278–516 µm (Fig.
Climacosphenia elongata, GU44BM-7, except as noted A valve with valvocopula in LM, showing consistently narrow craticular bars, some double (arrowheads) (GU44X-2) B apical part of a valve with valvocopula in SEM, showing the progressive narrowing of the annular ring (series of small arrows) and the wider space between craticular bars where the nucleus resides (thick arrow) C narrow portion of valve with valvocopula showing the fibmbriae D basal pole of valve with valvocopula, showing the scattered pattern of areolae inside the annulus gradually becoming regular striae, development of costae (arrow), and complex unions in the craticular bars E external view of apical pole showing annulus (double-headed arrow) and spines F frustule in girdle view showing the two girdle bands G, H valvocopula near basal pole and in tapering part at top of “stem,” respectively, showing complex versus simple unions in the craticular bars (TK4). Scale bars: 100 µm (A); 50 µm (B); 10 µm (C–H).
The shape and morphometrics accord adequately with the literature on C. elongata, the narrow craticular bars, especially in the stem, differing from the sturdy bars and oval spaces of C. moniligera, and from the very long-stemmed specimens depicted by
?
Differing from C. elongata in the greater length, especially in the stem, and narrower, linear apical portion, and from C. truncata Hustedt ex Simonsen in the shape of the wide part of the valve.
Cells attached in small groups to stout, branched mucilage stalks (Fig.
Climacosphenia elegantissima sp. nov., (GU52AI-1 except B from GU52U-2) A, D living cell, showing extreme length and location of nucleus (arrow) B acid-cleaned complete valvocopula, emphasizing the very long, narrow stem C portion of colony, showing cells attached to mucilage stalk; the two cells to right of middle are 1300 µm long E detail of mucilage stalk with bases of attached cells. Scale bars: 250 µm (A–C); 50 µm (D, E).
Climacosphenia elegantissima sp. nov., cont. GU52AI-1, except GU52U-2 (B) and GU52X-1 (G, H) A whole mount of colony in SEM, showing contrasting width versus depth of frustule in the stem (arrows at approximately same distance from apical poles) B portion of holotype in LM; although specimen is broken in two places, the basal pole of the valvocopula is also present, total length ca. 835 µm C apical pole of valve and valvocopula in LM, showing parallel sides of annulus and some misaligned unions in the craticular bars D SEM of external valve surface at apical pole, showing annulus (double-headed arrow) continuing around apical pole, two spines, and crescent of scattered areolae at top of mantle (arrow) E external valve surface at basal pole, showing variation in areola density and alignment within the annulus, apparent discontinuity of annulus at pole, and width of basal pole relative to stem (cf. H at same scale) F internal aspect of basal pole of valve and valvocopula, showing absence of pseudoseptum (arrow) and associated structure in valvocopula G, H internal aspect of valve at apical pole, showing crescent of scattered areolae (arrow) and in the narrow stem, respectively I oblique view of basal pole with valve and valvocopula, showing increase in areola density on the valvocopula around the pole (arrow) and short row of pores on pars interior (arrowhead). Scale bars: 200 µm (A); 50 µm (B); 10 µm (C–H); 5 µm (I).
Climacosphenia elegantissima sp. nov., cont. GU52U-2 (A), GU52X-1 (B, C), GU44AI-5 culture (D), GU52AI-1 (E) A whole mount of frustule apical pole in girdle view, showing two girdle bands, patch of irregular areolae on the valve mantle (arrow), spines (arrowheads) B part of valvocopula broken away and showing a solid circular cross-section of the craticular bar (arrowhead) and well-developed fimbriae (arrow) C portion of valvocopula from stem, showing double craticular bars, ingrowths from opposite sides D apical pole with valvocopula showing porous bands of silica around several craticular bars E detail of copula showing stria density and fimbriate margin on pars interior. Scale bars: 10 µm (A, D, E); 5 µm (B, C).
(designated here). Specimen at 16.1 mm E, 12.8 mm S of the mark on slide 1861; deposited at Academy of Natural Sciences, Drexel University, Philadelphia, accession number ANSP GC20108. Fig.
Phycobank http://phycobank.org/103246.
Guam: Apra Harbor, Scuba Beach, 13.464°N, 144.656°E, epiphytic on filamentous red algae in farmer fish territory, collection number GU52U-2, 10 May 2015. C.S. Lobban and M. Schefter leg.
GU44AI-5! (culture), GU44BM-7!, GU52G-B!, GU52X-1!, GU52Y-3B!, GU52AI-1!.
Superlative of elegans, with reference to the slender appearance of the extremely long cells.
The width of the apical pole and especially the distance between the annular lines are narrower than in C. elongata (Table
Cells tapering uniformly and strongly curved, the septa “delicate,” very narrow, “and showing at the middle either obscurely or not at all the break or sutural division common to specimens of this genus.” Length 414 µm, width at apical pole 28 µm, stria density not specified.
GUAM: GU52U-2!, GU52AH!, GU44Z-15!. F.S.M.: Chuuk: TK28!.
Specimens fitting this description have been found in Guam and Chuuk, often together with C. elegantissima. Colonies on branched mucilaginous stalks, the nucleus near the apical pole between two of the widely spaced craticular bars (Fig.
Climacosphenia scimiter, all from GU52X-1 A colony of living cells on branched mucilage stalk B valve and valvocopula of cleaned material, LM-DIC, showing consistently narrow craticular bars C, E valve in phase contrast LM, showing more strongly silicified basal pole in C and weakly silicified apical portion in E, along with difference in stria density; note appearance of annulus at basal pole (arrow, C) D basal pole in SEM, oblique view, showing shallow mantle and very weak costae and apparently discontinuous annulus. Scale bars: 50 µm (A, B); 10 µm (C–E).
Climacosphenia scimiter, cont. All GU52X-1 except D, GU52U-2 A apical pole of valve, exterior view, showing stria density and spines B detail of valve internal aspect, showing absence of costae C detail of external valve face at basal pole, showing more scattered areolae inside annulus D whole mount of frustule, apical pole, showing spines and girdle bands E–G valvocopulae showing consistently seamless craticular bars. Scale bars: 100 µm (E); 10 µm (A, C, D, F, G); 5 µm (B).
Observations are completely in accord with
Differing from C. moniligera in apical stria density and delicate craticular bars throughout, seamless except for complex unions in the most basal 1–4 bars and from C. scimiter in straight outline, presence of complex unions, and cell width.
Valves straight, gradually tapering from apical pole almost to basal pole (Fig.
Climacosphenia soulonalis sp. nov. All TK4 A–C holotype valve with valvocopula, entire, basal pole and apical pole, respectively, showing seamless craticular bars except near basal pole; arrowheads on B show complex unions D external valve apical pole showing irregular patch of areolae (arrow), spines, and narrowing of the annulus at apical pole E internal aspects of basal and apical poles, showing lack of costae (contrast costae in the piece of Synedrosphenia crystallina to the right) F, G valvocopula with two complex unions at the basal pole (arrowheads, F) and showing the row of pores on the pars interior around the basal pole (arrow). Scale bars: 100 µm (A); 10 µm (B–G).
(designated here). Specimen at 17.8 E, 10.9 mm S of the mark on slide 153; deposited at ANSP, accession number GC20109. Fig.
Phycobank http://phycobank.org/103247.
Federated States of Micronesia: Chuuk: Northeast Pass into Chuuk Lagoon, 7.514°N, 151.967°E, on algal turf from farmer fish territory, lee side of Moch I., collection number TK4!, 30 May 1991. C.S. Lobban and M. Schefter leg.
Chuuk: TK28!, exposed reef, ca. 6 m deep, southeast corner of Northeast Passage.
Belonging to Sou-lon, “the Chuukese god of ocean depths and storms, equivalent, perhaps to Neptune” (W.M. Peck 1992, Chuukese Testament. Storyboard: A Journal of Pacific Imagery 2: 44).
Valves resemble C. moniligera in size and stria densities (Table
The cladistic analysis of the character set (Suppl. material
Genus | Valve wall | Polar architecture† | Striae on valve face | Central long costa | Craticular bars |
---|---|---|---|---|---|
Ardissonea | Double | Complex | Linear | Absent | Absent |
Synedrosphenia | Single | Complex | Linear | Absent | Absent |
Ardissoneopsis | Single | Simple | Linear | Absent | Absent |
Grunowago | Single | Simple | Linear | Present | Absent |
Toxarium | Single | Complex | Scattered | Absent | Absent |
Climacosphenia | Single | Simple | Linear | Absent | Present |
Strict consensus tree summarizing the 18 most-parsimonious trees resolved from the cladistic analysis of the morphological dataset in Suppl. material
Under all three analytical programs, a well-supported clade (bootstrap support [bs] = 100%, posterior probability [pp] = 1.0) contained all the sequenced Climacosphenia, Toxarium, Grunowago and Ardissonea sensu lato strains (Fig.
Phylogenetic trees resulting from three analytical methods of the 3-gene DNA sequence dataset assembled for this manuscript. Only the Ardissoneaceae and their sister group in the molecular phylogeny, Lampriscus, is shown here—the complete trees can be found in Suppl. materials
The genera Climacosphenia and Toxarium were also monophyletic in all three analyses (bs > 99%, pp = 1.0), though their position relative to other taxa changed between the analyses. The Climacosphenia sequences were sister to the rest of the clade in the ExaBayes analysis (pp = 1.0). In the Maximum Likelihood analyses, Climacosphenia was either sister to the Ardissonea clades (IQTREE, bs = 63%) or sister to the Ardissoneopsis-morphotype strains, but with extremely low support (RAxML, bs = 18%). Strains with the Ardissonea sensu stricto morphology were either sister to the Synedrosphenia morph strains (IQTREE bs = 75%, ExaBayes pp = 0.73) or sister to a clade containing the Grunowago and Synedrosphenia morphs (RAxML bs = 77%). The Ardissoneopsis morph clade was sister to the rest of the Ardissonea sensu lato clades in the IQTREE and ExaBayes analyses (bs = 85%, pp = 0.98, respectively), but in a clade with Climacosphenia which was sister to Toxarium in the RAxML analysis (bs = 30%).
The results support a conclusion that there is one monophyletic group containing six genera (Table
There is a clear distinction within Ardissonea sensu lato, between species with a double wall and those with a single wall, as noted by
Synedrosphenia was kept separate from Synedra by
The new genus Ardissoneopsis is necessary to accommodate Ardissonea-like species with single walls but simple polar architecture. These include not only two species in Micronesia that we had previously identified with Ardissonea fulgens and its var. gigantea, but also Grunow’s Synedra undosa, which we were able to observe for the first time in SEM, and a new species. While it is better to have a positive synapomorphy for a genus, the complexity of the apical structure of valve and valvocopula in some other genera in this group is a strong character, comparable to the presence of an inner wall layer, and warrants separating those that have it from those that do not. This genus is presently small but we anticipate it will grow as Ardissoneaceae are more fully explored in other regions.
The new genus Grunowago is required to accommodate a new species and Synedra bacillaris. The latter cannot remain in Synedra, which, although defined by
Our study was largely restricted to observations on materials from Western Pacific Islands, those from Guam usually examined fresh, others only after acid cleaning. Having stubs with remnants from Grunow’s Honduras materials, we made use of them, but the large specimens were very broken up and we had much more success with species with distinctive shapes (Synedra undosa, Toxarium undulatum, Figs
Despite the limitations of the study, we can draw some conclusions about the Families and Order. Molecular and morphological evidence support a hypothesis that the six genera in our flora are in one monophyletic family but there is no known common ancestor, from which to derive a synapomorphy for the Family, which now appears to stand alone in an Order with no other Mediophyceae nearby. In the past they were placed in several Families and usually more than one Order; the most recent summary of diatom taxonomy has them in four families under one Order, Toxariales (
Much work remains to be done even in our region to tease out the biodiversity of these genera, and that work depends on progress in other regions and especially on type materials. Some species, e.g., Ardissonea formosa and A. pulcherrima, were described from the East Indies, others from Atlantic/Caribbean waters, e.g. A. robusta from Kattagat Strait, Europe, and several species from Honduras. In many cases precise type locations are unknown – Hantzsch received samples labeled only from the East Indies Archipelago; Lindig did not inform Grunow whether his Honduras samples were from its east or west coast. It is tempting but counterproductive to assume that everything is everywhere. Moreover,
Highly elongate valves with development from a bifacial annulus (not always visible) and lacking rimoportulae and apical pore fields (ocelli/ocellulimbi). Frustules often morphologically heteropolar in valve view, girdle view, or both, attached to substrata by mucilage stalks. Valves with simple areolae in uniseriate striae, internal transapical costae more or less developed. Valvocopula and copula closed, fimbriate internal margins. Pleura (when present) narrow, fimbriate inner margin, with larger apical caps.
With the characters of the Order.
Ardissonea De Notaris, sensu stricto
Ardissoneopsis Lobban & Ashworth, gen. nov.
Synedrosphenia (Peragallo) Azpeitia
Grunowago Lobban & Ashworth, gen. nov.
Toxarium J.W. Bailey
Climacosphenia Ehrenberg
Valves elongate, linear to lanceolate, alveolate except at the apical pole, owing to an internal silica plate and longitudinal costae under the annulus and sometimes under the midline. Inner plate opening through several large foramina at the poles and each alveolus opening by a small foramen into the cell interior.
Ardissonea robusta (Ralfs) De Notaris (generitype).
Ardissonea densistriata Lobban sp. nov.
Ardissonea formosa (Hantzsch) Grunow ex De Toni.
Ardissonea pulcherrima (Hantzsch) Grunow ex De Toni.
Synedrosphenia gomphonema (Janisch and Rabenhorst) Hustedt, 1932. Synonym.
≡ Synedra gomphonema Janisch & Rabenhorst, 1863 Beiträge zur näheren Kenntniss und Verbreitung der Algen. Heft I, p. 13, pl. 2: fig. 6. Synonym.
Sceptroneis cuneata Grunow,1877, Monthly Micros. J. 18: 169, pl. 194, fig. 3 ≡ Synedra cuneata Grunow, 1866, Hedwigia 1: 5.
Phycobank http://phycobank.org/103264.
Valves elongate, linear or tapered from a broader apical pole. Wall a single layer usually with internal costae on the virgae, and a pseudoseptum on the rim of the valve at each pole, forming a complex structure with the valvocopula. Midline absent or indistinct (not subtended by a longitudinal costa), annulus usually evident, though sometimes coinciding with the valve-mantle junction.
Synedrosphenia gomphonema (Janisch and Rabenhorst) Hustedt (= Sceptroneis cuneata Grunow; type species).
Synedrosphenia baculum (Gregory) Lobban & Ashworth, comb. nov.
Synedrosphenia bikarensis sp. nov.
Synedrosphenia crystallina (C. Agardh) Lobban & Ashworth comb. nov.
Synedrosphenia fulgens (Greville) Lobban & Ashworth comb. nov.
Synedrosphenia licmophoropsis sp. nov.
Synedrosphenia parva sp. nov.
Diatoma crystallinum
C.
Synedra crystallina (C. Agardh) Kützing, 1844, Die Kieselschaligen Bacillarien oder Diatomeen, p. 69, pl. 16: fig. 1. Synonym.
Ardissonea crystallina
(C. Agardh) Grunow ex
Phycobank http://phycobank.org/103250.
Synedra baculus Gregory, Trans. Micr. Soc. London, 5: p. 83, pl. 1, fig. 54, 1857. Based on GenBank sequence wk76 (Wiebe Kooistra). Basionym.
Phycobank http://phycobank.org/103252.
Since baculum (baton, rod) is used as a noun in apposition, it should retain its neuter ending, even though
In addition, A. dalmatica (Kützing) De Toni, 1892, shown by
Exilaria fulgens Greville, Scottish Cryptogamic Flora, Vol. 5: pl. 291, 1827. Basionym.
Synedra fulgens (Greville) W.Smith, A Synopsis of British Diatomaceae, vol. 1, p. 74, pl. 12, fig. 103, 1853. Synonym.
Ardissonea fulgens (Greville) Grunow ex De Toni, Sylloge, p. 674, 1892. Synonym.
Ardissonea fulgens (Greville) Kanjer, Kusber & Van de Vijver 2021, Notulae Algarum 215: 1–6, figs 1–16. Synonym.
Phycobank http://phycobank.org/103259.
We do not include Ardissonea fulgens var. gigantea (Lobarzewsky) Rabenhorst in this transfer because of the uncertainty about its morphology.
Valves single walled, isopolar or weakly heteropolar, simple polar architecture on valve and valvocopula.
Ardissoneopsis undosa (Grunow) Lobban & Ashworth comb. nov.
Ardissonea [named for Italian phycologist Francesco Ardissone (1837–1910)] + -opsis, L. similar to.
Ardissoneopsis fulgicans Lobban & Ashworth, sp. nov.
Ardissoneopsis appresssata Lobban & Ashworth, sp. nov.
Ardissoneopsis gracilis Lobban sp. nov.
Ardissoneopsis undosa (Grunow) Lobban & Ashworth comb. nov.
Phycobank http://phycobank.org/103240.
Synedra undosa
Toxarium undosum
(Grunow)
Phycobank http://phycobank.org/103260.
Valves linear to lanceolate, isopolar; uniseriate striae, virgae thickened internally and a prominent longitudinal costa under the midline. Annulus not apparent even on the valve–mantle junction. No pseudoseptum but continuous rim on valve border.
Grunowago bacillaris (Grunow) Lobban & Ashworth.
Grunow + -ago (from agere, to move, perform, achieve, etc.; see
Grunowago bacillaris (Grunow) Lobban & Ashworth, comb. nov.
Grunowago pacifica sp. nov.
Phycobank http://phycobank.org/103244.
Synedra crystallina var. bacillaris
Ardissonea crystallina var. bacillaris
(Grunow) Grunow in
Synedra superba
Peragallo 1900, Diatomees Marine de France, pl. 79, fig. 7 (
Synedra bacillaris
(Grunow)
Phycobank http://phycobank.org/103261.
Terance Camacho was a 2019 intern supported by the NSF-funded U. Guam Louis Stokes Alliances for Minority Participation (LSAMP) Islands of Opportunity grant and worked on the early stages of imaging and analysis. The new SEM and later stages of imaging and write-up of this project were supported by the National Science Foundation award No. OIA-1946352, RII Track-1: Guam Ecosystems Collaboratorium for Corals and Oceans (GECCO); any opinions, findings, and conclusions or recommendations expressed in this material are those of the author(s) and do not necessarily reflect the views of the National Science Foundation. Financial support for SEM and sequencing efforts at the University of Texas at Austin was provided by the Harold C. and Mary D. Bold Regents Professorship of Cryptogamic Botany (Phycology) to ECT.
CSL thanks Dr. Anton Igersheim, formerly at the Natural History Museum Vienna (W), for providing the Grunow sample for SEM and Dr. Wolf-Henning Kusber, Botanischer Garten und Botanisches Museum Berlin, for expert advice on the nomenclature and for registering our taxonomic acts with PhycoBank. CSL is grateful to Andrew McInnis for the Bikar samples and to María Schefter for continuous help in the field and at home with the Western Pacific Benthic Marine Diatoms Project. DWL acknowledges an award of time on the University of Alabama high performance supercomputer (UAHPC) cluster. We thank David M. Williams at the Natural History Museum in London, UK for invaluable advice on describing morphological characters and on executing the cladistic analysis of morphology. Especial thanks to the three reviewers for their thoughtful and detailed suggestions for improvement of the ms. Finally, Joon Sang Park is acknowledged for his contribution to the combination Climacosphenia soulonalis Lobban & Joon S.Park.
Table S1. Metadata for strains used in the molecular phylogenetic analysis, including strain extraction voucher ID and GenBank accession numbers
Data type: Table of GenBank numbers (word file)
Explanation note: Table S1. Metadata for strains used in the molecular phylogenetic analysis, including strain extraction voucher ID and GenBank accession numbers. Collection site for the source of the original strain isolation is also included, where known. Extraction voucher ID corresponds to the culture material extracted for the DNA used here and references dried frustules left over from the DNA extraction as well as photomicrographs of the cells, available from authors MPA or ECT. Taxa are listed alphabetically.
Table S2. Morphological characters and character states evaluated for the morphological cladistic analysis
Data type: Morphological character matrix (excel file)
Explanation note: Table S2. Morphological characters and character states evaluated for the morphological cladistic analysis. Taxa are arranged by the taxonomy proposed in this manuscript, but are labeled by their basionyms. Character state “U” indicates where the state is unknown for a taxon. Characters “pseudoseptum” and “valvocopula external poration” were treated as additive in the analysis.
Figure S1. Plastids in a living cell of Ardissonea formosa showing movement from dispersed (peristrophy) to concentrated around the nucleus (karyostrophy)
Data type: Images (jpg. file)
Explanation note: Figure S1. Plastids in a living cell of Ardissonea formosa showing movement from dispersed (peristrophy) to concentrated around the nucleus (karyostrophy). Process already underway in Fig.
Figure S2. Toxarium sp. from Guam
Data type: SEM images (jpg. file)
Explanation note: Figure S2. Toxarium sp. from Guam. A–C SEM showing rippled margin and single row of mantle pores. A–C GU44S / HK210 / ECT 3802. D–F Wild specimen from GU44BK-1 showing undulate outline but single row of areolae on mantle (F, arrow). Scale bars: 50 µm (A, D), 10 µm (E, F), 5 µm (B, C).
Figure S3. Molecular phylogenetic tree illustrating the results of the RAxML Maximum Likelihood analysis of the 3-gene dataset
Data type: Phylogenetic tree (pdf. file)
Explanation note: Figure S3. Molecular phylogenetic tree illustrating the results of the RAxML Maximum Likelihood analysis of the 3-gene dataset (nuclear-encoded small subunit rDNA, chloroplast-encoded rbcL and psbC markers). The taxon Bolidomonas pacifica was used as an outgroup and all taxa labels are followed by Extraction Voucher ID or Strain ID. Bootstrap support values are present at each corresponding node. This is the complete tree which corresponds to Fig.
Figure S4. Molecular phylogenetic tree illustrating the results of the IQTREE Maximum Likelihood analysis of the 3-gene dataset
Data type: Phylogenetic tree (pdf. file)
Explanation note: Figure S4. Molecular phylogenetic tree illustrating the results of the IQTREE Maximum Likelihood analysis of the 3-gene dataset (nuclear-encoded small subunit rDNA, chloroplast-encoded rbcL and psbC markers). The taxon Bolidomonas pacifica was used as an outgroup and all taxa labels are followed by Extraction Voucher ID or Strain ID. Bootstrap support values are present at each corresponding node. This is the complete tree which corresponds to Fig.
Figure S5. Molecular phylogenetic tree illustrating the results of the ExaBayes Bayesian Inference analysis of the 3-gene dataset
Data type: Phylogenetic tree (pdf. file)
Explanation note: Figure S5. Molecular phylogenetic tree illustrating the results of the ExaBayes Bayesian Inference analysis of the 3-gene dataset (nuclear-encoded small subunit rDNA, chloroplast-encoded rbcL and psbC markers). The taxon Bolidomonas pacifica was used as an outgroup and all taxa labels are followed by Extraction Voucher ID or Strain ID. Posterior probability values are present at each corresponding node. This is the complete tree which corresponds to Fig.