Research Article |
Corresponding author: Grzegorz J. Wolski ( grzegorz.wolski@biol.uni.lodz.pl ) Academic editor: Matt von Konrat
© 2021 Grzegorz J. Wolski, Paulina Nowicka-Krawczyk, William R. Buck.
This is an open access article distributed under the terms of the Creative Commons Attribution License (CC BY 4.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
Citation:
Wolski GJ, Nowicka-Krawczyk P, Buck WR (2021) Plagiothecium schofieldii, a new species from the Aleutian Islands (Alaska, USA). PhytoKeys 184: 127-138. https://doi.org/10.3897/phytokeys.184.69970
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Plagiothecium schofieldii sp. nov. is described from the Aleutian Islands, Alaska, U.S.A. Some morphological features of this species correspond to P. lamprostachys (Southern Hemisphere species); however, Plagiothecium schofieldii is genetically and morphologically different from this and other common Northern Hemisphere species e.g., P. denticulatum, P. platyphyllum, or P. ruthei. The most important distinguishing morphological features differentiating this species are: the arrangement of the leaves on the stem; dimensions, concavity and symmetry of the leaves; dimensions of cells and their areolation; orientation of capsules. Additionally, due to the strong concavity of the leaves, they are very often badly damaged under the microscope. We present the results of DNA research of the analyzed samples, and a detailed description of the morphological features. The new species is illustrated, and its ecological preferences and currently known geographical distribution are presented. Additionally, the authors propose to add this species to Plagiothecium section, which is confirmed by morphological features and genetic analysis.
Bryophyta, Plagiotheciaceae, taxonomy, W. B. Schofield
Over the last several years, our perception has changed not only of Plagiothecium Schimp., but also of the whole family of Plagiotheciaceae M.Fleisch. (e.g.,
Although the Northern Hemisphere seems to be relatively well researched, there are still many areas (e.g., central Asia, Middle East) which remain as gaps on the world distribution map of Plagiothecium (
The Aleutian Islands, Alaska, U.S.A., are one of the many under-explored regions of the Northern Hemisphere. As a result of the taxonomic revision of Plagiothecium specimens from this area it was possible to describe a new species from this genus; the results are presented below.
Material from the Missouri Botanical Garden (
The molecular research was based on nuclear and chloroplast DNA markers: ITS (from the 3’ end of the hypervariable nuclear spacer ITS1, through the 5.8S gDNA, to the 5` end of the ITS2 spacer); and rpl16 cpDNA gene encoding ribosomal protein L16. Markers were selected based on
Leafy stems of mosses were cut from dried material. Approximately 20 mg of dry tissue from each specimen in duplicates was placed in a 1.5 ml Eppendorf Safe-Lock tube and frozen (-20 °C) for homogenization. Tissue homogenization was performed using a hand-held stainless steel homogenizer (Schlüter Biologie, Eutin, Germany). Total DNA was extracted using the GeneMATRIX Plant & Fungi DNA Purification Kit (Eurx, Gdansk, Poland) following the manufacturer’s protocol. DNA extracts were quantified with a BioDrop DUO Spectrophotometer (BioDrop Ltd, Cambridge, U.K.). From the duplicates, the sample with the higher quality DNA (1.7–1.9 OD260/OD280) was selected for further analysis.
For each sample, all markers were amplified by PCR in a few replicates to obtain high quality amplicons for sequencing. PCR was performed using primers and reaction conditions as described in
PCR products were visualized on an agarose gel (1.5%, 90V, 40 minutes) stained with GelRED fluorescent dye (Biotum, Fremont, CA, U.S.A.) and two replicates of each marker per sample were chosen for sequencing. Amplicons from the PCR reaction were cleaned using Syngen Gel/PCR Mini Kit (Syngen Biotech, Wrocław, Poland) according to the manufacturer’s protocol. Samples were sequenced with Sanger sequencing using primers from amplification by SEQme s.r.o. company (Dobris, Czech Republic). The obtained sequences were assembled in Geneious 11.1.5 (Biomatters Aps, Aarhus, Denmark) (http://www.geneious.com). The sequences were submitted to the NCBI GenBank database (www.ncbi.nlm.nih.gov) under the accession numbers MW936654- MW936657 for ITS and MW935831–MW935834 for rpl16.
Phylogenetic analyses of studied specimens and other species in the Plagiothecium group were performed based on a concatenated ITS-rpl16 sequence matrix. Voucher information for the specimens included in this study, with corresponding GenBank accession numbers, is presented in Table
Voucher information and accession numbers for the specimens included in the phylogenetic analyses.
Taxon | Collection | Locality | ITS | rpl16 |
---|---|---|---|---|
Plagiothecium berggrenianum | S-B44769 | Russia: Pacific Siberia, Yakutiya | KY550267 | KY513972 |
Plagiothecium brasiliense | E barcode E00387968 | Brazil | KY550266 | KY513971 |
Plagiothecium conostegium |
|
Bolivia | KY550271 | KY513976 |
|
Guatemala | KY550318 | KY514024 | |
S-B53327 | Mexico | KY550272 | KY513977 | |
Plagiothecium curvifolium | DUKE barcode 0209096 | Canada: BC | KY550273 | KY513978 |
CP: G.P. Rothero s.n. | Germany: Hochschwarzwald | KF882228 | KF882328 | |
Plagiothecium denticulatum | CP: J.T. Wynns 2081 | Denmark: Sorø kommune, Sjælland | KF882229 | KF882329 |
Plagiothecium denticulatum var. bullulae | UC barcode 1947417 | USA: CA | KY550277 | KY513982 |
UC barcode 1798690 | USA: NV | KY550278 | KY513983 | |
Plagiothecium denticulatumvar.obtusifolium | CP: J.T. Wynns 2842 | Germany: Schauinsland, Hochschwarzwald | KF882230 | KF882330 |
UC barcode 1724036 | USA: WA | KY550279 | KY513984 | |
Plagiothecium denticulatum fo. pungens | DUKE barcode 0150010 | USA: AK | KY550280 | KY513985 |
Plagiothecium laetum | CP: J.T. Wynns 2907 | Germany: Schauinsland, Hochschwarzwald | KF882234 | KF882334 |
C barcode CP0010626 | USA: NC | KY550292 | KY513997 | |
C barcode CP0010627 | USA: NC | KY550293 | KY513998 | |
OK2066 | Germany | MK934644 | MK941642 | |
OK2035 | Russia: Krasnodar, Shakhe | MK934647 | MK941645 | |
Plagiothecium lamprostachys | S-B54613 | Australia: VIC | KY550284 | KY513989 |
DUKE barcode 0156846 | Australia: VIC | KY550285 | KY513990 | |
Plagiothecium latebricola | CP: I.L. Goldberg s.n. | Denmark: Holmegårds Mose, Sjælland | KF882235 | KF882235 |
Plagiothecium lucidum |
|
Chile | KY550298 | KY514003 |
BONN: J.-P. Frahm 12–6 | New Zealand | KY550299 | KY514004 | |
Plagiothecium membranosulum | BONN: J.-P. Frahm 7756 | Democratic Republic of the Congo | KY550310 | KY514015 |
S barcode B78514 | South Africa | KY550303 | KY514008 | |
DUKE barcode 0016754 | South Africa | KY550304 | KY514009 | |
Plagiothecium mollicaule |
|
Brazil | KY550300 | KY514005 |
Plagiothecium ovalifolium | DUKE barcode 0188886 | Chile | KY550314 | KY514019 |
Plagiothecium pacificum | UC barcode 1921143 | USA: CA | KY550295 | KY514000 |
Plagiothecium platyphyllum | CP: J. Lewinsky et al. s.n. | Finland: Haluna, Nilsiae, Savonia borealis | KF882241 | KF882341 |
Plagiothecium rossicum | OIK-2019 isolate OK2054 | Russia: Kunashir | MK934622 | MK941625 |
OIK-2019 isolate OK2032 | Russia: Smolensk | MK934629 | MK941630 | |
Plagiothecium ruthei | CP: J.T. Wynns 1997 | Denmark: Lyngby Aamose, Sjælland | KF882242 | KF882342 |
Plagiothecium svalbardense | C-M-9109 | Greenland: W5 | KY550296 | KY514001 |
Plagiothecium angusticellum | Wolski 22 | Poland | MN077507 | MN311142 |
Plagiothecium longisetum | Wolski 19 | Poland | MN077506 | MN311141 |
Isopterygiopsis pulchella | UC barcode 1947397 | USA: CA | KY550336 | KY514042 |
P1 MO5135779 | MO5135779 | USA: Alaska, Simeonof Island | MW936657 | MW935834 |
P2 MO5140205 | MO5140205 | USA: Alaska, Simeonof Island | MW936656 | MW935833 |
P3 MO5148015 | MO5148015 | USA: Alaska, Simeonof Island | MW936655 | MW935832 |
P4 NY02589541 | NY02589541 | USA: Alaska, Adak Island | MW936654 | MW935831 |
Summary of partitions for ITS-rpl16 matrix (1574 bp) evolutionary model selection and phylogenetic interference using PartitionFinder2.
ITS1 | 5.8S gDNA | ITS2 | rpl16 intron | rpl16 codon | |
---|---|---|---|---|---|
ML | JC | JC | HKY +I | TIM+I+G | JC |
BI | JC | JC | HKY | F81 | JC |
Phylogenetic calculations were performed using maximum likelihood analysis (ML) in the IQ-TREE web server (
Haplotype network analysis was performed using Median Joining Network in PopART v. 1.7 with gap coding as a single event irrespective of length and haplotypes` geographic distribution (
Phylogenetic analyses based on the concatenated ITS-rpl16 matrix placed studied specimens within the branch of a Plagiothecium sect. Plagiothecium clade, or sister to it; however, the branch support was very low (BS = 49). The next branch down is to representatives of sect. Orthophyllum Jedl. and even more distant to sect. Leptophyllum Jedl. clade (Fig.
Phylogenetic tree of Plagiothecium taxa with Isopterygiopsis pulchella as the outgroup based on concatenated nuclear (ITS1-5.8S-ITS2) and chloroplast (rpl16) DNA markers (total 1574 bp). The tree presents the position of Plagiothecium morphotypes from Alaska among the Plagiothecium group which is divided into individual sections. Numbers on branches indicate bootstrap values from ML followed by posterior probabilities from BI analysis. Asterisk (*) indicates 100 (ML) and 1.00 (BI), while minus (-) indicates values below 50 (ML) and 0.7 (BI). The topology of the tree was based on ML analysis.
The haplotype network (Fig.
The individual taxonomic features of Plagiothecium are related to a specific level of detail in our analyses, and for example: superficial layer of the stem (epidermis layer) of large, thin-walled cells; shortly pointed leaves; serration (if present) only at apex; absence of pseudoparaphyllia; leaves clearly decurrent at the base – distinguish this genus from other genera belonging to the Plagiotheciaceae. Within Plagiothecium, the shape of decurrent alar regions, and the shape of their cells distinguishes the species of individual sections, while the shape and dimensions of leaf cells are the most important features distinguishing species from each other (
Species that are widespread in the Northern Hemisphere: Plagiothecium denticulatum (Hedw.) Schimp., P. platyphyllum Mönk., and P. ruthei Limpr., significantly differ in morphology from P. schofieldii, which, compared to the above-mentioned species, has erect stems, while the others are usually prostrate, or sometimes prostrate to ascending (
Leaves of P. schofieldii are julaceous and imbricate – very closely arranged on the stem, while in other species the leaves are strongly complanate, flaccid, and spreading on the stem. In the Northern Hemisphere only in P. denticulatum shoots are rarely julaceous (
Stem leaves of Plagiothecium schofieldii are very strongly concave, to such an extent that under the microscope they are clearly damaged and cracked from being flattened by the coverslip. The leaves of the closely related species are rather flat. Only in the case of P. denticulatum are the leaves more or less concave, but never to such an extreme (
Plagiothecium schofieldii is clearly distinguished from P. denticulatum, P. platyphyllum and P. ruthei by the length and width of it laminal cells. The cells located in the central part of the leaf are long and very wide (88–190 × 13–29 μm), which makes the cell areolation very loose. None of the above-mentioned species has such long and broad cells, and thus their cell areolation is tighter (
Another feature that clearly distinguishes this newly described species from the previous species in sect. Plagiothecium is the orientation of the capsules. In the studied specimens of P. schofieldii, the capsules are orientated most often more or less vertically, i.e., erect, rarely inclined. Plagiothecium denticulatum, P. platyphyllum, and P. ruthei have inclined capsules (
On the other hand, in terms of morphology, P. schofieldii looks more like P. lamprostachys (Hampe) A. Jaeger – a Southern Hemisphere species (
Additionally,
All the above morphological data, supported by molecular studies, warrant the recognition of the Aleutian samples as a new species.
U.S.A. Alaska, Shumagin Islands, Simeonof Island, mainly near saddle between Hill 1436 and 1265, wet cliff chimney, 54°55'N, 159°15'W, 19 July 1996, W.B. Schofield 106119, Holotype MO5135779.
Plants small, light green to yellow, with a delicate metallic luster, forming very dense, often homogeneous mats. Stems erect, 1.5–3.0 cm long (Fig.
The present species is named in honor of Wilfred “Wilf” Borden Schofield (1927–2008), who spent decades studying northern regions of North America, including the Aleutian Islands, and who on July 19, 1996, collected the specimen (No. 106119), chosen here as the holotype of Plagiothecium schofieldii. According to Stephen Talbot (pers. comm.), Schofield recognized this plant as distinct in the field.
Plagiothecium schofieldii so far has only been recorded from Adak Island, Attu Island and Simeonof Island in Alaska. In this area it has been recorded on wetlands and hills, wet cliff chimney, open, moist crevice of a cliff, shaded face of hole on slope, shaded humid outcrop, along creek and adjacent slope, near saddle between hills and near base of mountain.
U.S.A. Alaska: Adak Island, Finger Bay, along creek and adjacent slope, open, moist, crevice of cliff, 15–30 Jun 1975, D. K. Smith 3864 (NY02589541); Attu Island, near Jaemin Pass, slopes of Ribson Ridge, shaded face of hole on slope, 52°53'N, 173°10' W, 10 Aug 2000, W. B. Schofield & S. S. Talbot 115646,
We thank the late Dr. Judy Harpel for the opportunity to revise the Aleutian Plagiothecium species. The research was funded from a grant Genetic study on variability of selected taxa of the genus Plagiothecium NCN „Miniatura 4” – DEC-2020/04/X/NZ8/00420.