Research Article |
Corresponding author: Bine Xue ( xuebine@zhku.edu.cn ) Academic editor: Thomas L.P. Couvreur
© 2020 Bine Xue, Yanwen Chen, Richard M. K. Saunders.
This is an open access article distributed under the terms of the Creative Commons Attribution License (CC BY 4.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
Citation:
Xue B, Chen Y, Saunders RMK (2020) Phylogenetic relationships of ‘Polyalthia’ in Fiji. PhytoKeys 165: 99-113. https://doi.org/10.3897/phytokeys.165.57094
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The genus Polyalthia (Annonaceae) has undergone dramatic taxonomic changes in recent years. Nine Polyalthia species have historically been recognized in Fiji, all of which have subsequently been transferred to three different genera, viz. Goniothalamus, Huberantha and Meiogyne. The transfer of six of these species has received strong molecular phylogenetic support, although the other three species, Polyalthia amoena, P. capillata and P. loriformis [all transferred to Huberantha], have never previously been sampled in a phylogenetic study. We address this shortfall by sampling available herbarium specimens of all three species and integrating the data in a molecular phylogenetic analysis. The resultant phylogeny provides strong support for the transfer of these species to Huberantha. The taxonomic realignment of all nine Fijian species formerly classified in Polyalthia is also clearly demonstrated and supported by the resultant phylogeny. The updated taxonomic treatments of the nine species, a key to the three genera and a key to the Fijian Huberantha species are provided.
Annonaceae, Fiji, Huberantha, molecular phylogeny, Polyalthia
The genus Polyalthia Blume (Annonaceae) has historically been the source of considerable taxonomic confusion (
In Fiji, ten species were published under the name Polyalthia (
As the genus Huberantha is taxonomically challenging and difficult to recognize, the transfer for some species based on limited collections may be problematic in the absence of molecular evidence. One example is Polyalthia floribunda Jovet-Ast from Vietnam (
As nomenclatural transfers based solely on morphological data can sometimes be misleading, molecular phylogenetic data can provide invaluable evidence for confirming correct taxonomic placement. To avoid such errors, we have therefore sampled the remaining three Fijian Huberantha species and undertaken a phylogenetic study to confirm their taxonomic placements.
Three Fijian Huberantha species that lack DNA sequence data–H. amoena, H. capillata and H. loriformis–were sampled in this study to verify their generic position. The other six previously recognized Fijian ‘Polyalthia’ species were also included in this study. Sequence data for three commonly used chloroplast regions (matK, rbcL and trnL-F) were newly generated for the three Huberantha species. Sequences for other taxa were downloaded from the nucleotide database of the National Centre for Biotechnology Information (http://www.ncbi.nlm.nih.gov). The final data matrix comprised a total of 77 Annonaceae species, representing the major clades in the family. The samples, localities and GenBank accession numbers are listed in the Appendix
The phylogenetic trees were reconstructed using Bayesian Inference (BI) and maximum likelihood (ML) methods. Detailed information regarding DNA extraction, PCR amplification, and primer sequences are available (
The concatenated alignment of the 77-taxon dataset consisted of 3,659 aligned positions (trnL-F: 1,475 bp; matK: 834 bp; and rbcL: 1,350 bp). The Bayesian and ML analyses resulted in similar topologies. The 50% majority-rule consensus tree resulting from the Bayesian analysis under the three-partitioned model is shown as Fig.
The Fijian species previously assigned to Polyalthia are retrieved in three distinct clades (Fig.
The transfer of Polyalthia amoena, P. capillata and P. loriformis to Huberantha is supported here in a molecular phylogenetic analysis for the first time. The four Fijian Huberantha species form a well-supported clade that shows a close affinity with H. nitidissima (distributed in Papua New Guinea, Australia, and New Caledonia) and H. jenkinsii (distributed in continental Asia and western Malesia). The clade comprising Polyalthia nitidissima and the Fijian ‘Polyalthia’ species is well separated from its sister clade consisting of species from continental Asia, Africa and Madagascar; this is consistent with the phylogeny including only one Fijian Huberantha species (H. vitiensis) published by
Huberantha can be distinguished from other closely related genera by a combination of characters, including leaves with reticulate tertiary venation, axillary inflorescences, a single ovule per ovary (and therefore single-seeded monocarps), seeds with a flat to slightly raised raphe, spiniform(-flattened peg) ruminations of the endosperm, and pollen with a finely and densely granular infratectum (
The taxonomic placement of Goniothalamus angustifolius and the four Meiogyne species (M. amygdalina, M. habrotricha, M. insularis and M. laddiana) are confirmed in our study (Fig.
The transfer of Polyalthia amoena, P. capillata and P. loriformis to Huberantha is supported here in a molecular phylogenetic study for the first time. The phylogenetic analyses of previous Fijian Polyalthia species confirm that this group is a highly heterogeneous assemblage, with nine species now divided into three distantly related genera, viz. Goniothalamus, Huberantha and Meiogyne. The updated taxonomic treatments of the nine species, a key to the three genera and a key to the four Huberantha species, are provided below.
Polyalthia angustifolia A.C.Sm., Bull. Torrey Bot. Club 70: 538. 1943.
Fiji, Viti Levu, Naitasiri Province, Tamavua woods, 7 miles from Suva, 9 Aug. 1927, J.W. Gillespie 2198 (holotype: A[A00039617]; isotypes: GH[GH00039618], BISH).
Polyalthia amoena A.C.Sm., Journal of the Arnold Arboretum 31: 159. 1950.
Hubera amoena (A.C.Sm.) Chaowasku, Phytotaxa 69: 47. 2012.
Fiji, Vanua Levu, Mathuata Province, east of Lambasa, on the summit ridge of Mt. Numbuiloa, 29 Oct. 1947, A.C. Smith 6423 (holotype: A[A00039619]; isotypes: BISH, BRI[BRI-AQ0211645], K[K000691676], L[L0038107], P[P00636930], S[S-G-7470], US[US00098656]).
Polyalthia capillata A.C.Sm., Journal of the Arnold Arboretum 31: 158. 1950.
Hubera capillata (A.C.Sm.) Chaowasku, Phytotaxa 69: 47. 2012.
Fiji, Viti Levu, Nandronga & Navosa Province, on the southern slopes of the Nausori Highlands, in the drainage of Namosi Creek, above Tumbenasolo, 29 May 1947, A.C. Smith 4581 (holotype: A[A00039620]; isotypes: BISH, BRI[BRI-AQ0332771], K[K000691675], US[US00098658]).
Polyalthia loriformis Gillespie, Bulletin of the Bernice P. Bishop Museum 83: 4, fig. 1. 1931.
Hubera loriformis (Gillespie) Chaowasku, Phytotaxa 69: 49. 2012.
Fiji, Viti Levu, Naitasiri Province, in the vicinity of Nasinu, 29 Oct. 1927, J.W. Gillespie 3639 (holotype: BISH[BISH1011147]; isotypes: BISH[BISH1011148], GH[GH00039622], NY[NY00026209]).
Polyalthia vitiensis Seem., Flora Vitiensis 1: 4, pl. 3. 1865.
Hubera vitiensis (Seem.) Chaowasku, Phytotaxa 69: 51. 2012.
Polyalthia pedicellata A.C.Sm., Bulletin of the Bernice P. Bishop Museum 141: 61, fig. 29. 1936.
Fiji, Ovalau, near Port Kinnaird, Jul. 1860, B. Seemann 4 (holotype: K[K000691678]).
Uvaria amydalina A.Gray, Bot. U.S. Expl. Exped. 1: 31. 1854.
Polyalthia amygdalina A.Gray Gillespie, Bernice P. Bishop Mus. Bull. 83: 4. 1931.
Desmos leucanthus A.C.Sm., J. Arnold Arbor. 31 (2): 156. 1950.
Fiji, Ovalau, 1840, Wilkes Explor. Exped. s.n. (hololectotype, designated by
Polyalthia habrotricha A.C.Sm., J. Arnold. Arbor. 31: 157–158. 1950.
Fiji, Viti Levu, Nandronga & Navosa Province, on the northern portion of the Rairaimatuku Plateau, between Nandrau and Rewasau, 11 Aug. 1947, A.C. Smith 5614 (holotype: A[A00019830]).
Desmos insularis A.C.Sm., Sargentia 1: 31–32. 1942.
Polyalthia insularis (A.C.Sm.) A.C.Sm., Allertonia 1: 351. 1978. Meiogyne stenopetala subsp. insularis (A.C.Sm.) Heusden, Blumea 38: 507. 1994.
Fiji, Viti Levu, Mba Province, east of Tavua, near Korovou, 1 Apr. 1941, O. Degener 14968 (holotype: A[A00019829]; isotypes: BISH[BISH1000666], F, K[K000691250], L[L0037996], MICH, P[P00636931], S, US, WIS).
Polyalthia laddiana A.C.Sm., Bernice P. Bishop Mus. Bull. 141: 60–61, fig. 28. 1936.
Fiji, Fulanga, 22 Feb. 1934, A.C. Smith 1147 (holotype: BISH; isotypes: GH[GH00039621], K[K000691674], NY[NY00026208], P[P00636929], S[S07-13360], US[US00098666], WIS[WIS00000302MAD]).
1 | Flowers with inner petals connivent, forming a mitriform dome over the reproductive organs | Goniothalamus |
– | Flowers with inner petals spreading | 2 |
2 | Inner petals adaxially grooved at the base; staminal connectives with a tongue-shaped apical prolongation in innermost stamens; 1 to many seeds per monocarp | Meiogyne |
– | Inner petals not grooved; staminal connectives of innermost stamens not expanded; 1 seed per monocarp | Huberantha |
1 | Leaf blade narrowly lanceolate; monocarps ellipsoid; stipe c. 10–20 mm long | H. amoena |
– | Leaf blade ovate or broadly lanceolate; monocarps oblong; stipe less than 10 mm long | 2 |
2 | Leaf base obtuse, petiole 8–12 mm long | H. capillata |
– | Leaf base rounded or subcordate, petiole 2–6 mm long | 3 |
3 | Young branches and leaves often persistently yellowish-hirsute | H. loriformis |
– | Young branches and leaves glabrous | H. vitiensis |
This research was supported by the National Natural Science Foundation of China (Grant no. 31872646) and Zhongkai University startup fund (KA200540805), both awarded to Bine Xue. We are grateful to the curators of A and NY for permission to access their collections and for permission to use the leaf materials for the first author’s PhD study. We are also grateful to Andres Ortiz Rodriguez, an anonymous reviewer and Thomas Couvreur for their constructive comments to improve this manuscript.
Voucher information and GenBank accession numbers for samples used in this study (—, missing data; *, newly generated sequences). Voucher data are given for accessions for which DNA sequences were newly obtained, using the following format: species, origin, voucher and Genbank accession numbers for matK, rbcL and trnL-F. For DNA sequences published in previous studies, voucher information is available from GenBank.
Alphonsea elliptica Hook.f. & Thomson, AY518807, —, AY319078; Ambavia gerrardii (Baill.) Le Thomas, AY220435, —, AY220411(intron), AY220358(spacer); Anaxagorea silvatica R.E.Fr., AY743477, AY743439, AY743458; Annickia chlorantha (Oliv.) Setten & Maas, AY841393, AY841594, AY841671; Annona glabra L., DQ125050, AY841596, AY841673; Asimina triloba (L.) Dunal, AY743479, AY743441, AY743460; Cananga odorata (Lam.) Hook.f. & Thomson, AY841394, AY841602, AY841680; Cleistopholis glauca Pierre ex Engl. & Diels, AY841395, AY841603, AY841681; Dasymaschalon macrocalyx Finet & Gagnep., EF179277, AY841610, AY841688; Dendrokingstonia nervosa (Hook.f. & Thomson) Rauschert, KJ418392, KJ418382, KJ418407; Desmopsis schippii Standl., AY518805, AY319060, AY319174; Desmos chinensis Lour., JQ768567, JQ762414, JQ762415; Fenerivia chapelieri (Baill.) R.M.K.Saunders, JF810375, JF810387, JF810399; Friesodielsia desmoides (Craib) Steenis, JQ768577, JQ768696, JQ768738; Goniothalamus angustifolius (A.C.Sm.) B.Xue & R.M.K.Saunders, KM818569, KM818797, KM818878; Goniothalamus grandiflorus (Warb.) Boerl., KM818587, KM818802, KM818851; Goniothalamus howii Merr. & Chun, KM818590, KM818833, KM818886; Goniothalamus majestatis P.J.A.Kessler, KM818598, KM818788, KM818903; Goniothalamus monospermus (A.Gray) R.M.K.Saunders, KM818601, KM818790, —; Goniothalamus tapis Miq., DQ125058, AY841622, AY841700; Goniothalamus wrayi King, KM818630, KM818803, KM818859; Greenwayodendron oliveri (Engl.) Verdc., AY743489, AY743451, AY743470; Guatteria anomala R.E.Fr., AY740913, AY740962, AY741011; Huberantha amoena (A.C.Sm.) Chaowasku, Fiji, Vanua Levu, A. C. Smith 6423 (A), MW024830*, —, MW024834*; Huberantha capillata (A.C.Sm.) Chaowasku, Fiji, Vanua Levu, A. C. Smith 4581 (A), MW024831*, —, MW024835*; Huberantha cerasoides (Roxb.) Chaowasku, AY518854, AY319017, AY319131; Huberantha decora (Diels) Chaowasku, —, —, JX544869; Huberantha henrici (Diels) Chaowasku, —, —, JX544870; Huberantha jenkinsii (Hook.f. & Thomson) Chaowasku, —, —, JX544803; Huberantha korinti (Dunal) Chaowasku, EU522234, EU522289, EU522179; Huberantha loriformis (Gillespie) Chaowasku, Fiji, Vanua Levu, J. W. Gillespie 2055 (NY), MW024832*, MW024833*, MW024836*; Huberantha nitidissima (Dunal) Chaowasku, KF682110, KF682103, KF682105; Huberantha pendula (Capuron ex G.E.Schatz & Le Thomas) Chaowasku, AY518852, AY319030, AY319144; Huberantha perrieri (Cavaco & Keraudren) Chaowasku, —, —, JX544871; Huberantha stuhlmannii (Engl.) Chaowasku, AY518853, —, AY319149; Huberantha tanganyikensis (Vollesen) Chaowasku, —, —, JX544872; Huberantha vitiensis (Seem.) Chaowasku, KM924849, KM924919, KM924950; Maasia discolor (Diels) Mols, P.J.A.Kessler & Rogstad, AY518872, AY319021, AY841584; Marsypopetalum crassum (R.Parker) BXue & R.M.K.Saunders, HQ286571, HQ286577, HQ286583; Meiogyne amicorum (A.C.Sm.) B.Xue, D.M.Johnson & R.M.K.Saunders, KF301021, —, KF573503; Meiogyne amygdalina (A.Gray) B.Xue, D.M.Johnson & R.M.K.Saunders, KF301022, —, KF573497; Meiogyne bidwillii (Benth.) D.C.Thomas, Chaowasku & R.M.K.Saunders, JQ723764, JQ723851, JQ723904; Meiogyne habrotricha (A.C.Sm.) B.Xue, D.M.Johnson & R.M.K.Saunders, KF301025, —, KF573498; Meiogyne hainanensis (Merr.) Bân, JQ723773, JQ723860, JQ723913; Meiogyne heteropetala (F. Muell.) D.C.Thomas, Chaowasku & R.M.K.Saunders, JQ723766, JQ723853, JQ723906; Meiogyne insularis (A.C.Sm.) D.C.Thomas, B.Xue & R.M.K.Saunders, KF301028, —, KF573502; Meiogyne laddiana (A.C.Sm.) B.Xue, D.M.Johnson & R.M.K.Saunders, KF301026, —, KF573499; Meiogyne stenopetala (F.Muell.) Heusden, JQ723779, JQ723866, JQ723919; Meiogyne virgata (Blume) Miq., AY518798, AY318982, AY319094; Miliusa cuneata Craib, AY518844, —, AY319097; Miliusa horsfieldii (Benn.) Pierre, AY518849, —, AY319098; Miliusa indica Lesch. ex A.DC., JQ723781, JQ723868, JQ723921; Miliusa thorelii Finet & Gagnep., AY518846, —, AY319104; Miliusa velutina (Dunal) Hook.f. & Thomson, AY518847, AY318993, AY319105; Mitrephora alba Ridl., AY518855, AY318994, AY319106; Monanthotaxis whytei (Stapf) Verdc., EF179278, AY841635, AY841713; Monocarpia euneura Miq., AY518865, AY318998, AY319111; Monoon lateriflorum (Blume) B.Xue & R.M.K. Saunders, JQ723783, JQ723870, JQ723923; Neo-uvaria acuminatissima (Miq.) Airy–Shaw, AY518793, AY318999, AY319112; Orophea enterocarpa Maingay ex Hook.f. & Thomson, AY518815, —, AY319119; Phaeanthus splendens Miq., AY518864, JX544754, AY319126; Piptostigma mortehani De Wild., AY743492, AY743454, AY743473; Platymitra macrocarpa Boerl., AY518812, AY319013, AY319127; Polyalthia johnsonii (F.Muell.) B.Xue & R.M.K.Saunders, JQ723767, JQ723854, JQ723907; Polyalthiopsis floribunda (Jovet-Ast) Chaowasku, Chaowasku 168, MG264583, MG264580, MG264575; Popowia pisocarpa (Blume) Endl., AY518862, AY319044, AY319158; Pseuduvaria fragrans Y.C.F.Su, Chaowasku & R.M.K.Saunders, JQ723784, JQ723871, JQ723924; Sageraea lanceolata Miq., AY518799, AY319050, AY319164; Sapranthus viridiflorus G.E.Schatz, AY743493, AY319051, AY319165; Stelechocarpus burahol (Blume) Hook.f. & Thomson, AY518803, AY319053, AY319167; Stenanona costaricensis R.E.Fr., AY518801, AY319069, AY319183; Tridimeris sp., JX544750, JX544753, JX544782; Trigynaea lanceipetala D.M.Johnson & N.A.Murray, AY743487, AY743449, AY743468; Trivalvaria macrophylla (Blume) Miq., HQ286576, HQ286582, HQ286588; Uvaria lucida Benth., AY238966, AY238957, EF179319; Wangia saccopetaloides (W.T.Wang) X.Guo & R.M.K.Saunders, KF680920, KF680926, KF680930; Wuodendron praecox (Hook.f. & Thomson) B.Xue, Y.H.Tan & X.L.Hou, MF687367, MF687373, MF687375.