Data Paper |
Corresponding author: Antonio Jesús Pérez-Luque ( ajperez@ugr.es ) Academic editor: Lyubomir Penev
© 2015 Antonio Jesús Pérez-Luque, Regino Zamora, Francisco Javier Bonet, Ramón Pérez-Pérez.
This is an open access article distributed under the terms of the Creative Commons Attribution License (CC BY 4.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
Citation:
Pérez-Luque AJ, Zamora R, Bonet FJ, Pérez-Pérez R (2015) Dataset of MIGRAME Project (Global Change, Altitudinal Range Shift and Colonization of Degraded Habitats in Mediterranean Mountains). PhytoKeys 56: 61-81. https://doi.org/10.3897/phytokeys.56.5482
Resource citation:
iEcolab, University of Granada-Andalusian Institute for Earth System Research (2015) Dataset of Global Change, altitudinal range shift and colonization of degraded habitats in Mediterranean mountains (MIGRAME). 3839 data records. Contributed by University of Granada, OBSNEV, Pérez-Luque AJ, Navarro-González I, Zamora R, Benito BM, Perez-Pérez R, Bonet FJ, Matías L, Ruiz-Puche R, Suzart F, Moreno-Llorca R, Rodríguez-Infante J. Online at http://www.gbif.es/ipt/resource.do?r=migrame and http://obsnev.es/noticia.html?id=7841, version 1.0 (last updated on 2015-05-13). Resource ID: GBIF Key: http://www.gbif.org/dataset/6c6a9003-ecea-4f3a-9f2f-414107da65c1
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In this data paper, we describe the dataset of the Global Change, Altitudinal Range Shift and Colonization of Degraded Habitats in Mediterranean Mountains (MIGRAME) project, which aims to assess the capacity of altitudinal migration and colonization of marginal habitats by Quercus pyrenaica Willd. forests in Sierra Nevada (southern Spain) considering two global-change drivers: temperature increase and land-use changes. The dataset includes information of the forest structure (diameter size, tree height, and abundance) of the Quercus pyrenaica ecosystem in Sierra Nevada obtained from 199 transects sampled at the treeline ecotone, mature forest, and marginal habitats (abandoned cropland and pine plantations). A total of 3839 occurrence records were collected and 5751 measurements recorded. The dataset is included in the Sierra Nevada Global-Change Observatory (OBSNEV), a long-term research project designed to compile socio-ecological information on the major ecosystem types in order to identify the impacts of global change in this mountain range.
Quercus pyrenaica forests, altitudinal migration, colonization of abandoned croplands, global change, Sierra Nevada (Spain), occurrence data, measurement data
Global Change, altitudinal range shift and colonization of degraded habitats in Mediterranean mountains (MIGRAME)
Regino Jesús Zamora Rodríguez (Principal Investigator, University of Granada)
The project MIGRAME (RNM-6734) was funded by the Excellence Research Group Programme of the Andalusian Government (Spain).
Currently, there is strong scientific evidence of the effects of global change on natural systems (
One of the most obvious biotic responses from global warming are the latitudinal and altitudinal shifts of species and communities (
The project Global Change, altitudinal range shift, and colonization of degraded habitats in Mediterranean mountains (MIGRAME) was designed to assess the capacity of altitudinal migration and colonization of marginal habitats by a Mediterranean forest ecosystem (
The Mediterranean region has shown broad climate shifts in the past (
In this context, Mediterranean ecosystems are considered natural laboratories in which to study global change, due to their high sensitivity to global-change drivers (
The target ecosystem of the project encompasses the Pyrenean oak forests (Quercus pyrenaica Willd.) of Sierra Nevada.
Sierra Nevada is a high-mountain range located in southern Spain (37°N, 3°W) with altitudes of between 860 m and 3482 m a.s.l. The climate is Mediterranean, characterized by cold winters and hot summers, with pronounced summer drought (July-August). The Sierra Nevada mountain range hosts a high number of endemic plant species (c. 80) (
For a description of the Pyrenean oak forests in Sierra Nevada, see Study extent description section.
The specific aims of the MIGRAME project are:
To analyse the relevance of altitudinal migration at the leading edge (high elevation) of the range distribution of Pyrenean oak formation.
To analyse the importance of the recolonization process of marginal habitats (abandoned croplands and pine plantations) close to Pyrenean oak formation.
Derived from the two global-change drivers, we have considered two main hypothesis (Figure
Altitudinal migration hypothesis
Several studies have pointed out a trend towards higher temperatures and lower precipitation for the Mediterranean area (
We hypothesised that the range shift of Q. pyrenaica in Sierra Nevada is changing as a consequence of recent changes to temperature, and we would expect an upward expansion (Figure
Marginal habitat colonization hypothesis
In Mediterranean area, cropland abandonment has been widespread during the second half of the last century (
We hypothesised that the land-use changes in high mountain (e.g. abandonment of croplands, management of pine plantations) should facilitate the native forest regeneration, and a process of colonization of marginal habitat (abandoned cropland, pine plantations) will occur (Figure
Overall, focusing on changes will occur in altitudinal migration and/or colonization of marginal habitats, we examine the following questions: Are altitudinal changes in Pyrenean oak forests associated with recent climate changes? Are they more consistent with changes in land use, or are they consistent with both global-change drivers?
This dataset includes records of the phylum Magnoliophyta (3823 records, 99.58%) and marginally Pinophyta (16 records, below 1% of total records). Most of the records included in this dataset belong to the class Magnoliopsida (99.58%). There are 5 orders represented in the dataset, with Fagales (98.98%) being the most important order. The other 4 orders (Rosales, Cupressales, Sapindales and Pinales) represent only 1.02% of the records. In this collection, 5 families are represented: Fagaceae, Rosaceae, Cupressaceae, Pinaceae, and Sapindaceae. The most represented taxa are Quercus pyrenaica Willd. and Quercus ilex L. (81.74 and 17.24%, respectively). Of the six taxa included on the dataset, three are considered threatened (Table
Kingdom: Plantae
Phylum: Magnoliophyta, Pinophyta
Class: Magnoliopsida (Dicotyledones), Pinopsida
Order: Fagales, Pinales, Cupressales, Sapindales, Rosales
Family: Fagaceae, Pinaceae, Cupressaceae, Sapindaceae, Rosaceae
Genus: Quercus, Pinus, Juniperus, Acer, Sorbus
Species: Quercus pyrenaica, Pinus sylvestris, Juniperus communis, Acer opalus subsp. granatense, Sorbus aria, Quercus ilex
Quercus pyrenaica forests
The Pyrenean oak (Quercus pyrenaica Willd.) forests extend through south-western France and the Iberian Peninsula (
Distribution of Quercus pyrenaica forests in Iberian Peninsula (a). Sierra Nevada harbours eight populations of Q. pyrenaica clustered into three groups (different colours). We selected two study sites: Robledal de Cañar (c) and Robledal San Juan (d). Colour Orthophotography of 2009 from Regional Ministry of the Environment, Regional Government of Andalusia.
The forests dominated by Q. pyrenaica constitute an ecosystem included in the Annex I of the Habitat Directive (habitat code 9230: Quercus pyrenaica oak woods and Quercus robur and Quercus pyrenaica oak woods from Iberian northwestern). The conservation status of this habitat is not well known (
This species reaches its southernmost European limit at Sierra Nevada mountains, where eight oak patches (2400 Has) have been identified (Figure
These forests, like other vegetation types, have undergone intense human pressure (wood cutting, grazing, etc.) which has reduced their distribution area and in some cases has altered their floristic pattern (
Q. pyrenaica is considered as vulnerable in southern Spain (
36°56'13.2"N and 37°8'9.6"N Latitude; 3°26'16.8"W and 3°20'16.8"W Longitude
2012–2014
Dataset of MIGRAME Project (Global Change, Altitudinal Range Shift and Colonization of Degraded Habitats in Mediterranean Mountains)
The MIGRAME dataset covers the Pyrenean oak forests (see Spatial coverage section) in Sierra Nevada mountain range (see Study area descriptions section).
We sampled two localities of the Pyrenean oak forests in Sierra Nevada: Robledal de Cañar and Robledal de San Juan. We selected those two sites based on previous works (
The sampling design was determined by the hypothesis of the project (see Project Design description section).
Altitudinal migration design
To test our hypothesis of altitudinal migration, we sampled a total of 104 transects (Table
Sampling Design. a Altitudinal migration hypothesis. At each study site, from the forest edge to treeline ecotone, we sampled each 25 m of elevation b Colonization of marginal habitat hypothesis. Transects were located on three habitat types: Forests (brown circles), Forest Edges (red squares) and Inside Marginal Habitats (blue triangles).
Locality | Altitudinal gradient | Transects |
||
---|---|---|---|---|
R1 | R2 | R3 | ||
Robledal de Cañar | 1900–2150 | 12 | 20 | 20 |
Robledal de San Juan | 1775–2000 | 18 | 18 | 16 |
Habitat colonization design
To test the hypothesis of colonization of marginal habitats, we laid out transects in two types of marginal habitats: abandoned agricultural areas and pine plantations (Figure
Transects | |||||
---|---|---|---|---|---|
Locality | Marginal habitat | Replicate | Surface (ha) | Inside | Edge |
Robledal de Cañar | Abandoned Cropland | R1 | 3.29 | 6 | 3 |
R2 | 5.80 | 9 | 3 | ||
R3 | 1.55 | 3 | 3 | ||
Pine plantation | 80.70 | 6 | 6 | ||
Robledal de San Juan | Abandoned Cropland | R1 | 3.46 | 6 | 3 |
R2 | 10.36 | 13 | 3 |
Forest samplings
In addition to the above surveys, we conducted a survey inside Q. pyrenaica forests. A total of 31 transects were distributed at the two sites.
We sampled a total of 199 linear transects of 30 m × 10 m (Suppl. material
Diagram of integration of the dataset within Information System of Sierra Nevada Global Change Observatory (http://obsnev.es/linaria.html). Field data were recorded with Smartphone devices (see
All data were stored in a relational database (PostgreSQL) and added to the Information System of Sierra Nevada Global-Change Observatory (Figure
The occurrence and measurement data were accommodated to fulfil the Darwin Core Standard (
The Darwin Core elements for the occurrence data included in the dataset were: occurrenceId, modified, language, institutionCode, collectionCode, basisOfRecord, catalogNumber, recordedBy, eventDate, day, month, year, continent, country, countryCode, stateProvince, county, locality, minimumElevationInMeters, maximumElevationInMeters, decimalLongitude, decimalLatitude, coordinateUncertaintyinMeters, geodeticDatum, scientificName, kingdom, phylum, class, order, family, genus, specificEpithet, infraspecificEpithet, scientificNameAuthorship.
For the measurement data, the Darwin Core elements included were: occurrenceId, measurementID, measurementType, measurementValue, measurementAccuracy, measurementUnit, measurementDeterminedDate, measurementDeterminedBy, measurementMethod.
Transects coordinates were recorded with a handheld Garmin eTrex Vista Global Positioning System (GPS, ±5 m accuracy,
The specimens were taxonomically identified using Flora iberica (
We also performed validation procedures (
Object name: Darwin Core Archive Dataset of MIGRAME Project (Global Change, Altitudinal Range Shift and Colonization of Degraded Habitats in Mediterranean Mountains)
Character encoding: UTF-8
Format name: Darwin Core Archive format
Format version: 1.0
Distribution: http://www.gbif.es/ipt/resource.do?r=migrame
Publication date of data: 2015-05-13
Language: English
Licenses of use: This “Dataset of MIGRAME Project (Global Change, Altitudinal Range Shift and Colonization of Degraded Habitats in Mediterranean Mountains)” is licensed under a made available under the Creative Commons Attribution Non Commercial (CC-BY-NC) 4.0 License http://creativecommons.org/licenses/by-nc/4.0/legalcode
Metadata language: English
Date of metadata creation: 2015-05-13
Hierarchy level: DataSet
Funding was provided by the project MIGRAME (RNM 6734) from the Excellence Research Group Programme of the Andalusian Government. This research work was conducted in the collaborative framework of the “Sierra Nevada Global Change Observatory (LTER platform)” Project from the Environment Department of Andalusian Regional Government, the Sierra Nevada National Park and the Spanish Biodiversity Foundation (“Fundación Biodiversidad”). We thank Katia Cezón and Franciso Pando (Spanish GBIF node–CSIC) for technical support. We also thank David Nesbitt for linguistic advice. A. J. Pérez-Luque would like to thank the MICINN of the Government of Spain for the financial support (PTA 2011-6322-I).
Table S1
Data type: Table
Explanation note: Information about transects of the project. Elevation in m a.s.l. Type: AM = Altitudinal migration; FO = Forest; MH = Marginal Habitat. Subtype: AC-e: Abandoned Cropland: edge; AC-i: Abandoned Cropland: inside; Pp-e: Pine plantations: edge; Pp-i: Pine plantations: inside; TE: Treeline Ecotone. Locality: CA = Robledal de Cáñar; SJ = Robledal de San Juan.