Research Article |
Corresponding author: Susanne S. Renner ( renner@lmu.de ) Academic editor: Norbert Holstein
© 2017 Susanne S. Renner.
This is an open access article distributed under the terms of the Creative Commons Attribution License (CC BY 4.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
Citation:
Renner SS (2017) A valid name for the Xishuangbanna gourd, a cucumber with carotene-rich fruits. PhytoKeys 85: 87-94. https://doi.org/10.3897/phytokeys.85.17371
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Herbarium specimens deposited in publicly accessible collections are the basis for all scientific names because only permanent specimens can be re-studied by independent researchers, the very essence of science. Re-investigations may be done with morphological, chemical, genomic, computer-tomographic, or other methods. Based on new herbarium material, I here provide a name for the Xishuangbanna gourd, a plant long cultivated in Yunnan because of its large non-bitter fruits, rich in β-carotene. Genome re-sequencing of numerous accessions has shown that this cucumber mutant is closer to Cucumis sativus var. sativus than is the wild bitter-fruited progenitor C. sativusvar. hardwickii, and two dozen studies have further clarified the genetics of key traits, including pulp color, fruit shape, and flowering times. Morphological and molecular diagnoses of the new variety are provided and museum-quality specimens have been distributed to the World’s major herbaria.
China, Yunnan, cucumber, Cucumis sativus , plant breeding, genomics, valid name
Southern Yunnan has a rich flora, with elements of both Indian and Chinese tropical biota, and local farmers from different ethnic backgrounds have long exerted diversifying selection on plants domesticated in this region of Southeast Asia. One such crop is the cucumber, Cucumis sativus L., of which bitter-fruited progenitor populations (C. sativusvar. hardwickii (Royle) Alef.) occur in the Himalayan foothills in India, Myanmar (Burma), North and West Thailand, and Southwest China (
The Xishuangbanna cucumber was brought to horticulturists’ attention by 1979–1980 investigations of crop cultivars of the Yunnan province (
Unfortunately, Qi and colleagues failed to make a type collection and to provide a Latin diagnosis or description, which in 1983 was still required for validly naming a plant taxon. No herbarium material is mentioned in their paper, but their text, geographic information, and B/W photos leave no doubt about which plant they are referring to. A search in the Chinese virtual herbarium (http://www.cvh.ac.cn/news/8) and correspondence with curators at KUN, IBSC, PE, and XTBG showed that no specimens have been deposited in these largest Chinese herbaria. The USDA’s National Plant Germplasm System (NPGS) has only germplasm PI 618931 of the Xishuangbanna gourd, but it is not available for distribution because it has proven difficult to regenerate (K. R. Reitsma, Curator of Vegetable Crops, North Central Regional Plant Introduction Station, Iowa State University, Ames, Iowa; personal communication on 9 June 2017). The Beijing Crop Germplasm Resources information system supported by the Vegetable Research Center (BVRC) maintains 1915 accessions labeled as ‘Cucumis sativus’ but provides no further taxonomic information; the database (icgr.caas.net.cn) supported by the Chinese Academy of Agricultural Sciences (CAAS) contains 1447 records for cucumber, again without further taxonomic data (Guo Shaogui, personal communication, 12 June 2017).
Based on newly prepared herbarium specimens from Xishuangbanna, I here provide a valid name for the Xishuangbanna cucumber and briefly discuss research results on its main traits.
Plants were collected on fields in the Xishuangbanna region and nine duplicates dried between newspaper.
Differs from all other forms of C. sativus in producing thick-cylindric fruits that have ≥ 5 carpels and at maturity a non-bitter orange pulp (Fig.
Verifiable DNA differences (characters): On chromosome 3, within the physical interval that spans the ore gene, Xishuangbanna cucumbers carry asparagine, whereas all other C. sativus (37 from East Asia, 29 from Eurasia, 30 from India) and homologous proteins from ten other species of flowering plants carry alanine at this site. This amino acid change at residue 257 (p.Ala257Asp) in Csa3G183920, affects a gene encoding a putative β-carotene hydroxylase, designated CsaBCH1 by
CHINA, Yunnan Province, Xishuangbanna region, Menglun, Mengla county. Farmland of the Jinuo people at 1200 m, collected in flower on 18 July 2017; young fruits photographed on 20 July 2017 to show the pulp just beginning to turn orange; Chang Yanfen 1141 (holotype: PE; isotypes; IBSC, K, KUN, L, M, MO, US, XTBG).
China (Yunnan), Laos, Vietnam, probably also Myanmar/Burma.
Flowering in July, mature fruits from the end of August onward (personal observation by Chang Yanfen).
Growing in a tropical warm, humid climate above 1000 m alt. This form of cucumber has long been cultivated by the Jinuo, Hani, and Aini ethnic groups of China, Laos, and Vietnam, who call it ‘shihuo’ (
The epithet was proposed by
The monograph of Cucumis by
Cucumber populations. a The core collection of 115 lines re-sequenced by
Physical position of the ore gene on Cucumis sativus chromosome 3. Blue diamonds below the seven chromosomes indicate the positions of 43 SNPs c Mutation at residue 257 changing the conserved amino acid of a putative β-carotene hydroxylase (CsaBCH1). Xishuangbanna group cucumbers carry asparagine, whereas all other cucumbers and homologous proteins from ten other species carry alanine dCsaBCH1 mRNA levels in Xishuangbanna cucumbers that accumulate β-carotene. Reproduced from
Cucumis sativus var. xishuangbannanensis has an orange endocarp high in carotenoids (
Flowering time and fruit size variation in the Xishuangbanna cucumber have also been studied, and a QTL analysis implicated 11 QTLs on two chromosomes in determining photoperiod-dependent flowering time and the round fruit shape (
Concerning the time of domestication of the Xishuangbanna cucumber, synteny analyses among C. sativusvar. sativus, var. hardwickii, and var. xishuangbannanensis have revealed that the Xishuangbanna cucumber shares major chromosomal rearrangements in chromosomes 4, 5, and 7 with var. sativus but not var. hardwickii, suggesting that it originated through diversifying selection after cucumber domestication (
I thank Chang Yanfen and Harald Schneider for preparing the specimens, and the following colleagues for important information: Yong Yang (PE), Dianxiang Zhang (SCBG), Shixiao Luo (SCBG), Rong Li (KUN), K. R. Reitsma (Ames, Iowa), Guo Shaogui (Beijing), and Yiqun Weng (University of Wisconsin-Madison).