Research Article |
Corresponding author: Yan Liu ( yanliuhrb@hotmail.com ) Academic editor: Kalina Manoylov
© 2025 Andrei Mironov, Anton Glushchenko, Elena Kezlya, Yevhen Maltsev, Anton Iurmanov, Yan Liu, Maxim Kulikovskiy.
This is an open access article distributed under the terms of the Creative Commons Attribution License (CC BY 4.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
Citation:
Mironov A, Glushchenko A, Kezlya E, Maltsev Y, Iurmanov A, Liu Y, Kulikovskiy M (2025) Decussiphycus sinensis sp. nov. (Bacillariophyceae, Mastogloiales) – a new species described from China, with comments on phylogenetic position of the genus. PhytoKeys 254: 1-19. https://doi.org/10.3897/phytokeys.254.142654
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During the study of freshwater diatom communities in Hainan Province, China, we uncovered an unknown diatom species of the genus Decussiphycus, which is described as Decussiphycus sinensis sp. nov. herein. The description is based on LM and SEM investigations; morphologically, the new species is compared to other taxa belonging to the genus. We complemented the description with the results of a molecular analysis based on SSU rDNA and rbcL sequencing. Molecular data is acquired for Decussiphycus for the first time. Hereby, we discuss the phylogenetic relationships between this genus and its closest allies – Aneumastus and Mastogloia, demonstrating the affinity of Decussiphycus within the order Mastogloiales.
Bacillariophyceae, Decussiphycus, Hainan Province, new species, phylogeny, pore occlusions
Throughout the years, diatomists praised different kinds of evidence while describing new species and genera or analyzing the taxonomy and phylogeny of high-rank groups (i.e. families and orders). While some taxonomists valued chloroplast morphology (
Originally, Decussiphycus emerged from Navicula placenta-group (
After its emergence at the genus-level, Decussiphycus has been considered to represent the order Mastogloiales D.G. Mann, which has been originally made up of Aneumastus D.G. Mann & Stickle and Mastogloia Thwaites ex W. Smith, solely (
Hitherto, the genus Decussiphycus has been comprised by only three morphologically close taxa – Decussiphycus placenta (Ehrenberg) Guiry & Gandhi, Decussiphycus placenta var. obtusus (F. Meister) Guiry & Gandhi and Decussiphycus hexagonus (Torka) Guiry & Gandhi. One unknown Decussiphycus species was found during the survey in the area of Wuzhishan Mountain in the Province of Hainan, China. Notably, as multiple studies revealed (
In the current study, we investigated a single sample of diatom biofilms, collected from an unnamed mountain stream at the slope of Wuzhishan Mountain, Hainan Province, China. The sample was treated with 10% hydrochloric acid to remove carbonates and then washed with deionized water for 12 h. To remove the organic matter, boiling in concentrated hydrogen peroxide (37%) was applied. Furthermore, the sample was washed with deionized water four times with 12 h intervals. It was then decanted and filled with deionized water up to 100 ml; the suspension was pipetted onto coverslips. Afterwards, it was left for drying at room temperature. A permanent sample was mounted in Naphrax® (refractive index = 1.73). Live material was viewed with a Zeiss Axio Scope A1 microscope with mounted Axiocam ERc 5s camera (Zeiss, Germany) and equipped with an oil immersion EC Plan-NEOFLUAR objective (x100, n.a. 1.3) for epifluorescent microscopy (EFM) and an oil immersion Plan-apochromatic objective (x100, n.a. 1.4; Nomarski differential interference contrast) for LM of cleaned material.
Later, a part of the suspension was spread onto aluminum stubs after air-drying at room temperature for 24 h in order to prepare SEM stubs. The stubs were then sputter-coated with 50 nm of Au by the means of Eiko IB 3 apparatus (Eiko Engineering, Japan). For SEM investigations, we applied the TESCAN Vega III (TESCAN, Brno, Czech Republic) in the Borissiak Paleontological Institute of the Russian Academy of Science. The suspension and slides analyzed herein are deposited in the collection of Maxim Kulikovskiy at the Herbarium of the Institute of Plant Physiology Russian Academy of Sciences, Moscow, Russia.
The terminology of the valve follows
The monoclonal strain Ca68 was established by micropipetting a single cell under a Zeiss Axio Vert. A1 inverted microscope (with × 10 objective). The strain was cultivated in WC liquid medium (
Genomic DNA was extracted with Chelex100 Chelating Resin (Bio-Rad Laboratories, Hercules, CA, USA) with primers D512for and D978rev for SSU rDNA (
Molecular analysis, as performed in this study, follows the algorithms described in
The dataset for multigene analysis was comprised of 29 concatenated SSU rDNA and rbcL sequences, selected for available lineages of 25 representatives of Mastogloiales sensu
The Bayesian inference (BI) method was conducted with Beast ver. 1.10.1 software (BEAST Developers, Auckland, New Zealand) (
Phylogeny of the Mastogloiales sensu
Slide 09153 in herbarium of MHA, Main Botanical Garden, Russian Academy of Science, Moscow, Russia, represented here by Fig.
Slide 08909 in herbarium of MHA, Main Botanical Garden, Russian Academy of Science, Moscow, Russia.
China. Hainan Province, unnamed stream at the northern slope of Wuzhishan Mountain, biofilms on rocks, 18.9815°N, 109.6854°E, 470 m asl, leg. Y. Liu, 12.07.2014. Slide 09153 from oxidized culture strain no. Ca68, isolated from sample THHN 2014043.
Strain Ca68 (slides 09153); sample THHN 2014043 (slide 08909).
Live cells
(Fig.
A–N Decussiphycus sinensis sp. nov. LM, DIC. Strain Ca68 A–H valve face view A–H girdle view A, E, I live cells. White arrows point to the nucleus, black arrows show the two apically located plastids B–D, F–H, J–N chloroplast autofluorescence. White arrows show the four lobes of each plastid. Scale bar: 10 µm.
LM (Figs
SEM, external view (Fig.
A–F Decussiphycus sinensis sp. nov. SEM, external view. Slide 09153 (from strain Ca68) A the entire valve; note the oppositely deflected distal raphe fissures B details of girdle bands structure; note the two rows of areolae (black arrowheads) C details of the central area; proximal raphe fissures expanded, slightly tilted to one side (white arrows) D, E details of the valve apex; note the distal raphe ends with silica folds (white arrowheads), areolae larger near the axial area (black arrows) and smaller towards the margin (white arrows), an isolated row of areolae (black arrowheads) F girdle bands; note the double rows of areolae with silica caps (black arrowheads). Scale bars: 10 µm (A, F); 0.5 µm (B); 2 µm (C–E).
SEM, internal view (Fig.
A–F Decussiphycus sinensis sp. nov. SEM, internal view. Slide 09153 (from strain Ca68) A the entire valve B details of striae structure near the valve margin; note the shallow margin (white arrows) C details of the central area; note proximal raphe fissures (white arrows) and ribs of the quincunx system (black arrowheads) D, E details of the valve apex; note the shallow valve margin (black arrows) with striae continuing onto it (white arrows), areolae with round occlusions near the sternum (black arrowheads) and oval occlusions towards the margin (white arrowheads). Apical expansions of the sternum indicated by asterisks F details of the valve apex; note the horseshoe-shaped helictoglossa (white arrow) and apical expansion of the sternum (asterisk). Scale bars: 10 µm (A); 2 µm (B–F).
The specific epithet refers to the name of the country where this species was discovered.
So far, the species is known only from the type locality.
The species was located in a mountain stream with temperature of 26.7 °C, pH = 7.64 and conductivity = 60 µS/cm.
Specimens of D. sinensis sp. nov. from wild population were 32.1–69.1 µm long, 13.9–18.3 µm wide, with striae width of 21–23 in 10 µm. Specimens from culture are characterized by smaller valves: 41.5–46.1 µm long, 15.5–17.1 µm wide; striae 22–23 in 10 µm, which corresponds to material from wild population.
Navicula placenta var. obtusa F.
Decussiphycus placenta var. obtusus (F. Meister) Guiry & Gandhi, 2019.
D. sinensis sp. nov. shares a number of similarities with other representatives of the genus (see Table
Comparison of morphological features of D. sinensis sp. nov. and related species.
D. sinensis sp. nov. | D. placenta | D. hexagona | D. obtusus | |
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Valve shape | linear-elliptic to elliptic | broadly elliptic | linear to linear-elliptic | elliptic |
Valve ends | broadly rounded | abruptly protracted, narrowly rostrate to subcapitate | narrowed to a wedge, finally obtusely rounded | broadly rounded |
Length, µm | 32.1–69.1 | 35–60 | 25–44 | 44–60 |
Width, µm | 13.9–18.3 | 14–20 | 9–13 | 21–25 |
Transapical striae in 10 µm | 21–23 | 20–25 | 20–25 | 20 |
Axial area | narrow, linear | narrow, linear | narrow, linear | narrow, linear |
Central area | transapically oval to circular | rather small, broadly elliptic in outline | transapically elliptic | circular |
Shape of areolae near the sternum, internally | distinguished by a larger diameter, rounded, covered with flat, slightly recessed rounded silica plates | rounded, transapically elongated and are covered with raised rounded silica plates | rounded, covered with raised silica caps | n.d. |
Shape of areolae near the valve margin, internally | become transapically elongated, covered with oval, raised silica caps | n.d. | n.d. | n.d. |
Ecology | confined to lotic ecosystems | confined to lotic ecosystems | confined to lotic ecosystems, found in acidified freshwaters, aerophile | confined to lotic ecosystems |
Distribution | Southeast Asia, China, Hainan (type locality) | widely distributed | widely distributed | Southeast Asia, Nepal |
References | This study |
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Lange-Bertalot, 2000, 2001; |
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D. sinensis sp. nov. resembles D. placenta by valve width (13.9–18.3 µm in D. sinensis sp. nov. vs. 14–20 µm in D. placenta) and striae density (21–23 in 10 µm in D. sinensis sp. nov. vs. 20–25 in 10 µm in D. placenta). However, D. sinensis sp. nov. differs from D. placenta by broadly rounded and unprotracted apices, while in D. placenta valve apices are distinctly protracted, narrowly rostrate to subcapitate (e.g.
Among D. sinensis sp. nov. and D. hexagona, striae densities are comparable: 21–23 in 10 µm in D. sinensis sp. nov. vs. 20–25 in 10 µm in D. hexagona (Table
Both D. placenta var. obtusus and the newly described species are characterized by narrow axial and circular central areas, as well as broadly rounded valve apices. At the same time, the species obviously differ in valve width (13.9–18.3 µm in D. sinensis sp. nov. vs. 21–25 µm in D. placenta var. obtusus) and striae density (21–23 in 10 µm in D. sinensis sp. nov. vs. 20 in 10 µm in D. placenta var. obtusus). The other ultrastructural morphological features of D. placenta var. obtusus are not studied yet.
As illustrated by F. Meister (
As described in the introduction, throughout the history of diatom science, taxonomists gave preferences to various types of evidence for their inquiries: from chloroplast characters, to valve structure, to, as nowadays, molecular data. On this challenging course, several mistakes were made, which, consequently, led to misunderstanding some taxa’s systematics and phylogeny. For instance, E. J.
At the same time, interrelationships within the discussed AMD group are still fully obvious. Taxonomic composition of Mastlogloia, which is the most species-rich genus of the AMD clade (Loir and Navarino 2013), is of particular interest. Mastlogloia includes several species with unique morphological features, i.e. Mastogloia fimbriata (T.Brightwell) Grunow lacking external terminal raphe fissures and an apical septum (
Our research describes a new species, Decussiphycus sinensis sp. nov., and proposes a new combination – Decussiphycus obtusus comb. et stat. nov. The new species description is based on a thorough investigation of valve morphology by means of LM and SEM, supplemented with the results of a two-gene molecular analysis. Thus, the new species can be distinguished by a combination of valve features (i.e. valve outlines, shape of apices, ultrastructure of areolae) and molecular data. In addition, we have made an attempt to investigate the morphological and molecular boundaries of the order Mastogloiales and discuss its relations with genera Craspedostauros and Achnanthes, underscoring the need for further research in this field.
The authors express their gratitude to senior researcher R.A. Rakitov (instrument analytics room of the Borissiak Paleontological Institute of the Russian Academy of Science, PIN RAS) for assistance in working with a scanning electron microscope.
Authors also express their gratitude to Wolf-Henning Kusber for his valuable advice in discussing nomenclature problems of genera Delicatophycus and Decussiphycus.
The authors have declared that no competing interests exist.
No ethical statement was reported.
Publication is based on research carried out with financial support by the National Natural Science Foundation of China (32470214) for culturing and LM and Russian Science Foundation (24-14-00165, https://rscf.ru/project/24-14-00165/ accessed on 22 November 2024) for molecular analysis and SEM, and by the framework of state assignment of the Ministry of Science and Higher Education of the Russian Federation (theme 122042700045-3) for finishing manuscript.
Conceptualization: MK, AM, AG. Data curation: AI, MK, AG. Formal analysis: AM, AG, EK. Funding acquisition: MK, YL. Investigation: AM. Methodology: YM. Project administration: YL. Supervision: YM, MK. Validation: EK, AI. Visualization: YM, AG. Writing - original draft: AM. Writing - review and editing: YM, YL, MK, EK.
Andrei Mironov https://orcid.org/0000-0001-9936-0652
Anton Glushchenko https://orcid.org/0000-0002-3876-3455
Elena Kezlya https://orcid.org/0000-0002-5263-9338
Yevhen Maltsev https://orcid.org/0000-0003-4710-319X
Anton Iurmanov https://orcid.org/0000-0002-0270-8737
Yan Liu https://orcid.org/0000-0001-8556-5040
Maxim Kulikovskiy https://orcid.org/0000-0003-0999-9669
All relevant data can be found within the article text and its Supplementary files.
Alignment of the rbcL and SSU rRNA genes used for phylogenetic analyses in this study
Data type: txt
The Bayesian phylogenetic topology for the rbcL and SSU rRNA genes tree
Data type: txt