Research Article |
Corresponding author: Yi-Hua Tong ( yh-tong@scbg.ac.cn ) Corresponding author: Nian-He Xia ( nhxia@scbg.ac.cn ) Academic editor: Weilim Goh
© 2023 Xing Li, Jing-Bo Ni, Zhuo-Yu Cai, Yi-Hua Tong, Nian-He Xia.
This is an open access article distributed under the terms of the Creative Commons Attribution License (CC BY 4.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
Citation:
Li X, Ni J-B, Cai Z-Y, Tong Y-H, Xia N-H (2023) Sinosasa gracilis (Poaceae, Bambusoideae), a new combination supported by morphological and phylogenetic evidence. PhytoKeys 226: 53-63. https://doi.org/10.3897/phytokeys.226.101164
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The results of phylogenetic analysis, based on the whole chloroplast genome and morphological study support the transfer of a long ignored bamboo species, Sasa gracilis, to the recently established genus, Sinosasa, in this study. Morphologically, this species differs from all the other known Sinosasa species by having very short (2–3 mm) foliage leaf inner ligules, which is unusual in this genus. A revised description of its morphology and colour photos are also provided.
bamboo, phylogeny, Sinosasa, taxonomy
Sinosasa L.C.Chia ex N.H.Xia, Q.M.Qin & Y.H.Tong was recently segregated from Sasa
Sasa gracilis B.M.
The specimens of Sasa gracilis were collected from its type locality during a field trip in September 2022. Fresh foliage leaves were deposited in silica gel for DNA extraction. Type specimens of Sasa gracilis deposited in the Herbarium of Hunan Normal University (
To study the phylogenetic position of Sasa gracilis within the tribe Arundinarieae, the whole chloroplast genomes were used for building the phylogenetic tree. A total of 24 representatives belonging to all the five subtribes of the tribe Arundinarieae (
List of 25 bamboo taxa sampled in the present study with the related voucher and GenBank accession information.
Taxon | Voucher information | Accession number |
---|---|---|
Ingroup | ||
Acidosasa glauca B.M.Yang | CZY56 (IBSC) | OP850353 |
Ampelocalamus actinotrichus (Merr. & Chun) S.L.Chen, T.H.Wen & G.Y.Sheng | MPF10003 (KUN) | MF066245 |
Chimonobambusa tumidissinoda Ohrnb. | MPF10083 (KUN) | MF066244 |
Fargesia edulis Hsueh f. & T.P.Yi | D418 (SANU) | MH988735 |
Gaoligongshania megalothyrsa (Hand.-Mazz.) D.Z.Li, Hsueh & N.H.Xia | MPF10056 (KUN) | JX513419 |
Gelidocalamus stellatus T H.Wen | BH102 (IBSC) | OP850347 |
Hsuehochloa calcareus (C.D.Chu & C.S.Chao) D.Z.Li & Y.X.Zhang | MPF10050 (KUN) | KJ496369 |
Indocalamus longiauritus Hand.-Mazz. | MPF10168 (KUN) | HQ337795 |
Indocalamus sinicus (Hance) Nakai | ZMY037 (KUN) | MF066250 |
Indosasa crassiflora McClure | BH58 (IBSC) | OK558536 |
Oligostachyum sulcatum Z.P.Wang & G.H.Ye | Not provided by the author | MW190089 |
Phyllostachys edulis (Carriere) J.Houzeau | MPF10163 (KUN) | HQ337796 |
Pleioblastus maculatus (McClure) C.D.Chu & C.S.Chao | MPF10161 (KUN) | JX513424 |
Pseudosasa cantorii (Munro) Keng f. | MPF10006 (KUN) | MF066255 |
Pseudosasa japonica (Siebold & Zucc. ex Steud.) Makino ex Nakai | Pjc-1 (ZJFC) | KT428377 |
Ravenochloa wilsonii (Rendle) D.Z.Li & Y.X.Zhang | MPF10146 (KUN) | JX513421 |
Sasa veitchii Rehder | LC1325 (ISC) | KU569975 |
Sasa gracilis B.M.Yang | LX153 (IBSC) | *OP973764 |
Shibataea chiangshanensis T.H.Wen | ZLN-2011080 (KUN) | MF066257 |
Sinosasa fanjingshanensis N.H.Xia, Q.M.Qin & J.B.Ni | BH124 (IBSC) | OP850348 |
Sinosasa longiligulata (McClure) N.H.Xia, Q.M.Qin & J.B.Ni | CZY163 (IBSC) | OP850351 |
Sinosasa sp. | CZY173 (IBSC) | OP850352 |
Sinobambusa tootsik (Makino) Makino ex Nakai | NH031 (IBSC) | OP850357 |
Yushania niitakayamensis (Hayata) Keng f. | Not provided by the author | MN310560 |
Outgroup | ||
Bambusa multiplex (Lour.) Raeuschel ex Schult. & Schult. f. | Not provided by the author | KJ722536 |
Total genomic DNA was extracted from leaves dried in silica gel using the Plant Genomic DNA Kit and then sent to Novogene (Tianjin, China) for DNA quality assessment. The qualified DNA fragments with 350 bp insert size were enriched by PCR experiment. Paired reads were sequenced on an Illumina NovaSeq 6000 platform. A total of 40 G genome skimming data (150 bp read length) were generated for each sample. These sequenced data were used to assemble the whole chloroplast genome by GetOrganelle v. 1.7.4 pipeline (
All the whole chloroplast genomes were aligned with MAFFT v. 7.490 (
The chloroplast genome size of Sasa gracilis is 140,013 bp and those of all the samples ranged from 139,394 bp (Bambusa multiplex) to 140,064 bp (Gaoligongshania megalothyrsa (Hand.-Mazz.) D.Z.Li, Hsueh & N.H.Xia) with an alignment of 144,169 bp. The data matrix was characterised by sequence divergence with 3,688 variable sites (2.56%), including 773 parsimony informative sites (0.54%) and 2,915 singleton variable sites (2.02%). The phylogenetic trees, generated by the ML and BI methods, were generally consistent in topology, so only the ML tree was shown with nodal support values from both methods labelled on each node (Fig.
Our phylogenetic analysis and previous studies of
Comparison of Sasa gracilis, Sinosasa guangxiensis and Sinosasa magninoda.
Characters | Sasa gracilis | Sinosasa guangxiensis | Sinosasa magninoda |
---|---|---|---|
Culm leaf | |||
Sheath | Glabrous on the mid- and upper part | Densely strigose | Glabrous or sparsely strigose |
Auricles | Elliptic to falcate, 2–4 ´ 1–2 mm | Ovate or oblong, 2–3 ´ 1–2 mm | Ovate, 1–1.5 × 1 mm |
Oral setae | Present, 2–10 mm long | Present, 3–10 mm long | Absent |
Ligule | 0.5–1 mm | 1–3 mm | 1–3 mm |
Foliage leaf | |||
Sheath | Glabrous | Puberulent | Glabrous |
Oral setae | 7–12, 8–20 mm | Ca. 10, 6–10 mm long | 1–4, 5–10 mm |
Inner ligule | 2–3 mm | 10–15 mm | 8–12 mm |
Sasa gracilis B. M. Yang, Acta Sci. Nat. Univ. Norm. Hunan. 13 (supplement): 1 (1990).
China. Hunan: Jiangyong County, Dayuan Township, Shangmuyuan, elev. 620 m, 28 October 1987, B. M. Yang 6774 (Holotype: HNNU00053209!)
Shrubby bamboos. Rhizomes leptomorph, internodes 4–5.5 cm long, 2–3.5 mm in diameter, solid. Culms pluricaespitose, 0.2–1.5 m tall, 1.5–7 mm in diameter; internodes terete, 2–15 cm long, upper part initially densely white puberulent, glabrescent when old, hollow; supranodal ridge 5–9 mm in diameter, strongly raised; intranode ca. 3 mm long, glabrous, densely puberulous in infranodal region; branches extravaginal, solitary at each branching node. Culm bud solitary, trullate, sunken into supranodal ridge, ciliate on the margin. Culm leaf sheath persistent or tardily deciduous, 1/2–1/3 as long as internodes, glabrous abaxially, except for the base with a 2–3 mm wide brown and downward-appressed hispid band, glabrous on the margin; sheath scar flat or slightly prominent; auricles elliptic to falcate, 2–4 × 1–2 mm, oral setae curved, 2–10 mm long; ligule truncate, 0.5–1 mm high, ciliolate on the margin; blade triangular to lanceolate, erect or reflexed, 5–10 mm long, glabrous, serrulate along the margin. Foliage leaves 5–12 per ultimate branch; sheath glabrous, green or purple-green, 8–12 mm long, margin glabrous, longitudinal ribs conspicuous; auricles elliptic to falcate, 1–2 × 1–1.5 mm, oral setae developed, 7–12, erect or curled, 8–20 mm long; inner ligule 2–3 mm high, slightly arcuate to truncate, glabrous; outer ligule ca. 1 mm high, abaxially puberulous, white ciliate on the margin; pseudopetioles glabrous, 4–8 mm long; blades oblong-lanceolate to lanceolate, 7–29 × 1.5–5 cm, papery, wavy when dry, both surfaces glabrous, apex long-attenuate, base cuneate to obtuse, margin serrulate; secondary veins 3–8 pairs, transverse veins conspicuous. Inflorescence unknown.
Sinosasa gracilis A habit B foliage leafy branch C culm bud and strongly raised supranodal ridge D culm leaf sheath base E partial culm, showing solitary branch F dried foliage leafy branch, showing wavy blades and a close-up view of glabrous sheath, short inner ligules, auricles and oral setae G culm leaf blade, auricles and oral setae H glabrous abaxial surface of culm leaf sheath. All photos by Xing Li.
New shoots from April to May.
It is endemic to Shangmuyuan Mountain in Jiangyong County, Hunan, China. It grows in moist places along the river banks in the valley at elevations of 600–1000 m.
纤细华赤竹 (Chinese pronunciation: xiān xì huá chì zhú).
Sinosasa gracilis: China. Hunan: Jiangyong County, Dayuan Township, Shangmuyuan, 18 September 2022, 25°24'24.7"N, 111°16'17.9"E, elev. 838 m, X. Li & J. B. Ni LX153 (IBSC).
Sinosasa guangxiensis: China. Guangxi: Rongshui County, Jiuwan Mountain, Gema, elev. 800 m, 23 April 1979, C. D. Chu & Z. Wang 7906 (isotypes: PE0008644, image, N019023145, image); Lingchuan County, Dajing Township, Qifen Mountain, 30 July 2006, C. X. Zeng & Y. X. Zhang 06179 (KUN0720003, image, KUN0719374, image, KUN0719386, image, KUN0719166, image, KUN0719167, image, KUN0719168, image, KUN0719169, image).
Sinosasa magninoda: China. Jiangxi: Jinggang Mountain, Longtan, Zhenzhutan, 26 May 1985, Liao et Xu 85017 (ZJFI); ibid. 28 May 1990, elev. 700 m, T. H. Wen & G. L. Liao 90551 (Holotype: ZJFI); ibid. 27 Aug 2017, X. R. Zheng 25 (IBSC).
We thank Xing-Min Zhou for his assistance in the fieldwork. This research was funded by the Guangdong Basic and Applied Basic Research Foundation (grant no. 2021A1515011302) and National Natural Science Foundation of China (grant no. 32270227).