Appendix 1
Voucher information for data set 1. Information is presented in the following order: taxon name, collector followed by collection number (herbarium acronyms follow Holmgren et al. 1990), country: region (if known), GenBank accesion numbers (psbA/rbcL/rps3/nad1). Lacking sequences are indicated by a dash (—). New sequences generated for this study are marked by an asterisk (*).
Acanthocoleus madagascariensis (Steph.) Kruijt, Pócs 97145/AA (GOET), Uganda, EF011843/DQ983649/—/—; Blepharolejeunea chimantaensis van Slageren & Kruijt, Pócs & Rico 00234/A (F), Venezuela, KF851876/—/—/KF852465; Bryopteris filicina (Sw.) Nees, Churchill, Magombo & Price 19855 (NY), Bolivia, AY607930/DQ439681/KF851576/KF852481; Caudalejeunea reniloba (Gottsche) Steph., Pócs et al. 01090/AB (F), Australia, KF851845/KF852294/KF851541/KF852441; Ceratolejeunea coarina (Gottsche) Schiffn., Zartman 1235.1 (DUKE), Brazil, AY607934/AY608026/—/KF852489; Cololejeunea microscopica (Taylor) Schiffn., Long & Rothero 37789 (E), Scotland: Wester Ross, KF851954/KF852386/KF851651/KF852552; Colura conica (Sande Lac.) K.I.Goebel, Pócs & Streimann 9986/W (F), Australia: Queensland, KM817490*/KM817513*/KM817536*/KM817462*; Colura imperfecta Steph., Pócs & Pócs 07019/A (F), Thailand, KF851881/KF852327/—/KF852469; Drepanolejeunea erecta (Steph.) Mizut., Long 28691 (E), Bhutan, JF513393/JF513452/KF851515/JF513342; Frullania albertii Steph., Davis 295 (DUKE), Ecuador, AY607942/DQ439685/KM817549*/KM817477*; Frullania atrata (Sw.) Nees ex Mont., Dauphin 3306 (F), Costa Rica, KM817491*/—/KM817540*/KM817466*; Frullania caulisequa (Nees) Mont., Karst, Shaw & Gibbs 022 (DUKE), USA: North Carolina, KM817500*/KM817526*/KM817553*/KM817481*; Frullania dilatata (L.) Dumort., Stotler 4666 (SIU), Portugal, KM817502*/KM817528*/KM817555*/KM817482*; Frullania eboracensis Lehm., Stotler 80-4354 (ABSH), USA: Illinois, AY688827/AY688779/KM817547*/KM817475*; Frullania ecklonii (Spreng.) Spreng. ex Gottsche, Lindenb. & Nees, Pócs 02030/W (F), Kenya, KM817488*/KM817510*/KM817533*/KM817459*; Frullania ericoides (Nees) Mont., Long 35167 (E), China: Yunnan, KM817486*/KM817507*/KM817531*/KM817456*; Frullania falciloba Taylor ex Lehm., Engel, von Konrat & Braggins 26837 (F), New Zealand, KM817489*/KM817511*/KM817534*/KM817460*; Frullania moniliata (Reinw., Blume & Nees) Mont., Mizutani s.n. (ABSH), Japan, AY507484/AY507401/KM817548*/KM817476*; Frullania nodulosa (Reinw., Blume & Nees) Nees, Pócs & Pócs 03261/A (F) Fiji, KM817492*/KM817517*/KM817541*/KM817467*; Frullania parhamii (R.M.Schust.) R.M.Schust. ex von Konrat, L.Söderstr. & A.Hagborg, von Konrat, Braggins & Naikatini 6/16-5 (F), Fiji, —/KM817516*/KM817539*/KM817465*; Frullania pycnantha (Hook.f. & Taylor) Taylor ex Gottsche, Lindenb. & Nees, von Konrat 99/409 (F), New Zealand, KM817499*/KM817525*/—/KM817480*; Frullania rostrata (Hook.f. & Taylor) Hook.f. & Taylor ex Gottsche, Lindenb. & Nees, Engel, von Konrat & Braggins 27770 (F), New Zealand, —/KM817512*/KM817535*/KM817461*; Frullania tamarisci (L.) Dumort. 1, Stotler 4661 (SIU), Portugal: Sintra, KM817501*/KM817527*/KM817554*/—; Frullania tamarisci 2, Long 35371 (E), France, KM817487*/KM817508*/KM817532*/KM817457*; Frullanoides densifolia Raddi, Gradstein 10171 (GOET), Ecuador, KF851930/KF852371/KF851634/KF852530; Fulfordianthus pterobryoides (Spruce) Gradst., Gradstein & Varon 11069 (GOET), Colombia, KF851931/KF852372/KF851635/KF852531; Jubula hutchinsiae (Hook.) Dumort. 1, Long 29077 (E), UK: England, —/KM817509*/—/KM817458*; Jubula hutchinsiae 2, Drehwald 3007 (GOET), Portugal, EF011746/AY548101/—/—; Jubula hutchinsiae subsp. bogotensis (Steph.) Verd., Gradstein s.n. (GOET), Mexico, EF011758/AY548100/—/—; Jubula hutchinsiae subsp. javanica (Steph.) Verd. 1, Konstantinova & Savchenko K479/1-07 (F), Russia, —/KM817506*/KM817542*/KM817468*; Jubula hutchinsiae subsp. javanica 2, Kodama s.n. (ABSH), Japan: Wakayama Pref., AY507492/AY507408/KF851585/JF513366; Jubula hutchinsiae subsp. pennsylvanica (Steph.) Verd., Risk 11005 (DUKE), USA, AY607954/KM817523*/KM817550*/—; Lejeunea deplanata Nees var. deplanata, Shaw F533 (DUKE), USA: North Carolina, KM817498*/KM817524*/KM817552*/KM817479*; Lejeunea japonica Mitt., Bakalin s.n. (F), Russia, —/KM817518*/KM817543*/KM817469*; Lejeunea tuberculosa Steph., Long 28596 (E), Bhutan, JF513394/JF513453/KF851518/JF513344; Leptolejeunea elliptica (Lehm.) Besch., Yamaguchi s.n. (F), Japan, KM817485*/KM817515*/KM817538*/KM817464*; Lopholejeunea eulopha (Taylor) Schiffn., Pócs et al. 08036/U (F), Fiji, KF851868/KF852314/—/—; Marchesinia mackaii (Hook.) Gray, Buryova 2181 (DUKE), UK: Wales, —/KF852356/KF851619/KF852515; Mastigolejeunea auriculata (Wilson) Steph., Shaw 6222 (DUKE), USA: Alabama, KF851917/KF852359/KF851622/KF852518; Neohattoria herzogii (S.Hatt.) Kamim., Furuki 22673 (F), Japan: Honshu, KM817504*/KM817530*/KM817557*/KM817484*; Nipponolejeunea pilifera (Steph.) S.Hatt., Ohnishi 5975 (HIRO), Japan, AM396291/AM392293/—/—; Nipponolejeunea subalpina (Horik.) S.Hatt., Ohnishi 5611 (GOET), Japan, AM396290/AM392292/—/—; Odontolejeunea lunulata (F.Weber) Schiffn., Picon et al. 00227/CE (F), Venezuela, —/KM817514*/KM817537*/KM817463*; Ptychanthus striatus (Lehm.) Nees, Pócs & Pócs 03288/O (F), Fiji, KF851872/KF852318/KF851558/KF852460; Radula buccinifera (Hook.f. & Taylor) Taylor ex Gottsche, Lindenb. & Nees, Engel, von Konrat & Braggins 23569 (F), New Zealand, KM817495*/KM817521*/KM817545*/KM817472*; Radula cuspidata Steph., Engel & von Konrat 23517 (F), New Zealand, KM817496*/—/KM817546*/KM817473*; Radula grandis Steph., Engel, von Konrat & Braggins 24847 (F), New Zealand, KM817494*/KM817520*/KM817544*/KM817471*; Radula lindenbergiana Gottsche ex C.Hartm., Stotler 4656 (SIU), Portugal, KM817503*/KM817529*/KM817556*/KM817483*; Radula perrottetii Gottsche ex Steph., Mizutani 15030 (F), Japan, —/DQ439700/KM817551*/KM817478*; Radula ratkowskiana K.Yamada, Engel, von Konrat & Braggins 24365 (F), New Zealand, KM817497*/KM817522*/—/KM817474*; Radula tasmanica Steph., Engel, von Konrat & Braggins 24874 (F), New Zealand, KM817493*/KM817519*/—/KM817470*; Spruceanthus thozetianus (Gottsche & F.Muell.) B.M.Thiers & Gradst., Pócs 01107/M (GOET), Australia, AM396273/AM384877/—/—; Stictolejeunea squamata (Willd. ex F.Weber) Schiffn., Dauphin & Gonzalez 2134 (GOET), Costa Rica: Alajeula, KF851951/—/—/KF852549; Thysananthus convolutus Lindenb., Gradstein 10205 (GOET), Indonesia: Java, KF851953/DQ983737/KF851650/KF852551.
Appendix 2
Voucher information for data set 2. Information is presented in the following order: taxon name, collector followed by collection number (herbarium acronyms follow Holmgren et al. 1990), country: region (if known), GenBank accesion numbers (ITS region/rbcL/trnL-F/psbA). Lacking sequences are indicated by a dash (—). New sequences generated for this study are marked by an asterisk (*).
Frullania kunzei (Lehm.) Lehm. & Lindenb., Costa & Gradstein 3769 (GOET), Brazil, FJ380536/FJ380863/FJ380387/FJ380697; Frullania nisquallensis Sull., Doyle 11001 (GOET), USA, FJ380503/FJ380826/FJ380349/FJ380661; Frullania peruviana Gottsche, Schaefer-Verwimp & al. 24356 (GOET), Ecuador, FJ380543/FJ380870/FJ380394/FJ380704; Frullanoides mexicana van Slageren, Burghardt 4421a, Mexico, DQ987366/DQ983682/DQ987464/EF011851; Fulfordianthus pterobryoides (Spruce) Gradst., Dauphin 2518, Costa Rica, AM237145/DQ983684/AM237198/EF011832; Jubula hutchinsiae (Hook.) Dumort., Ahonen, Huttunen et Virtanen 3190 (H), Taiwan, AY125350/AY125946/AY144477/—; Jubula hutchinsiae subsp. bogotensis (Steph.) Verd. 1, Gradstein s.n. (GOET), Mexico: Veracruz, FN396818/—/FN398013/—; Jubula hutchinsiae subsp. bogotensis 2, Gradstein s.n. (GOET?), Mexico, DQ987273/AY548100/DQ987388/AM396281; Jubula hutchinsiae subsp. bogotensis 3, Gradstein 9449 (GOET), Costa Rica, FN396817/—/FN398012/—; Jubula hutchinsiae subsp. bogotensis 4, Frahm et al. 1313 (GOET), Peru, FN396816/—/—/—; Jubula hutchinsiae subsp. caucasica Konstant. & Vilnet 1, Konstantinova K456-5-07 (KPABG), Russia: Caucasus, JN836964/—/JN836974/—; Jubula hutchinsiae subsp. caucasica 2, Konstantinova K429-3-08 (KPABG), Russia: Caucasus, JN836961/—/JN836971/—; Jubula hutchinsiae subsp. caucasica 3, Konstantinova K462-1-08 (KPABG), Russia: Caucasus, JN836960/—/JN836970/—; Jubula hutchinsiae subsp. caucasica 4, Konstantinova K463-1-07 (KPABG), Russia: Caucasus, JN836962/—/JN836972/—; Jubula hutchinsiae subsp. caucasica 5, Konstantinova K371-1-08 (KPABG), Russia: Caucasus, JN836958/—/JN836968/—; Jubula hutchinsiae subsp. caucasica 6, Konstantinova K446-7-08 (KPABG), Russia: Caucasus, JN836959/—/JN836969/—; Jubula hutchinsiae subsp. caucasica 7, Konstantinova K443-14-08 (KPABG), Russia: Caucasus, JN836963/—/JN836973/—; Jubula hutchinsiae subsp. hutchinsiae 1, Long 29077 (GOET), UK: Devon, FN396813/—/FN398010/—; Jubula hutchinsiae subsp. hutchinsiae 2, Long 35296 (GOET), UK: Wales, FN396814/—/FN398011/—; Jubula hutchinsiae subsp. hutchinsiae 3, Schaefer-Verwimp & Verwimp 25675 (GOET), Portugal: Madeira, FN396811/—/FN397099/—; Jubula hutchinsiae subsp. hutchinsiae 4, Schaefer-Verwimp & Verwimp 25796 (GOET), Portugal: Boaventura, FN396812/—/FN398009/—; Jubula hutchinsiae subsp. hutchinsiae 5, Drehwald & Reiner-Drehwald 3007 (GOET), Portugal, DQ987260/AY548101/DQ987380/AM396282; Jubula hutchinsiae subsp. japonica (Steph.) Horik. & Ando 1, Koponen et al. 54308 (H), China, AY125342/AY125938/AY144479/—; Jubula hutchinsiae subsp. japonica 2, Inoue BSE755 (GOET), Japan: Kochi, FN396809/—/—/—; Jubula hutchinsiae subsp. japonica 3, Gradstein & Mizutani 2958 (GOET), Japan: Miyazaki, FN396810/—/FN397098/—; Jubula hutchinsiae subsp. japonica 4, Bakalin P-68-10-08 (KPABG), Russia: Primorsky Kray, JN836967/—/JN836977/—; Jubula hutchinsiae subsp. javanica (Steph.) Verd. 1, Zhu et al. 3361 (HSNU), China: Hainan, FN396800/—/—/—; Jubula hutchinsiae subsp. javanica 2, Zhu et al. 20050903-7a (HSNU), China: Hainan, FN396801/—/—/—; Jubula hutchinsiae subsp. javanica 3, Long 34765 (GOET), China: Yunnan, FN396805/—/FN397095/—; Jubula hutchinsiae subsp. javanica 4, Pocs 98105/C (GOET), Viet Nam: Vin-Phuc, FN396807/—/—/—; Jubula hutchinsiae subsp. javanica 5, Pocs & Tran Ninh 98103/A2 (GOET), Viet Nam: Vin-Phuc, FN396808/—/FN397097/—; Jubula hutchinsiae subsp. javanica 6, Schaefer-Verwimp & Verwimp 18870/A (GOET), Malaysia: Pahang, FN396802/—/FN397094/—; Jubula hutchinsiae subsp. javanica 7, Zhu 555 (HSNU), China: Fujian, FN396806/—/FN397096/—; Jubula hutchinsiae subsp. javanica 8, Bakalin Kor-12-6-08 (KPABG), South Korea, JN836966/—/JN836976/—; Jubula hutchinsiae subsp. javanica 9, Schaefer-Verwimp & Verwimp 18935 (GOET), Malaysia: Pahang, FN396803/—/—/—; Jubula hutchinsiae subsp. javanica 10, Wang 685B (HSNU), China: Yunnan, FN396804/—/—/—; Jubula hutchinsiae subsp. pennsylvanica (Steph.) Verd. 1, Buck 39060 (H?), USA: West Virginia, AY776308/AY776303/AY776309/—; Jubula hutchinsiae subsp. pennsylvanica 2, Davison 5045 (UNAF), USA: Alabama, FN396819/—/—/—; Jubula hutchinsiae subsp. pennsylvanica 3, Davison 5201 (UNAF), USA: West Virginia, FN396821/—/FN398015/—; Jubula hutchinsiae subsp. pennsylvanica 4, Davison 4707 (UNAF), USA: Alabama, FN396822/—/FN398016/—; Jubula hutchinsiae subsp. pennsylvanica 5, Davison 3775a (UNAF), USA: Alabama, FN396823/—/FN398017/—; Jubula hutchinsiae subsp. pennsylvanica 6, Davison & Risk 2537 (UNAF), USA: Kentucky, FN396820/—/FN398014/—; Jubula hutchinsiae subsp. pennsylvanica 7, Konstantinova ACH-3-92 (KPABG), USA, JN836965/—/JN836975/—; Jubula hutchinsiae subsp. pennsylvanica 8, Davison 4690 (UNAF), USA, Alabama, FN396824/—/FN398018/—; Jubula hutchinsiae subsp. pennsylvanica 9, Hyatt 8212 (UNAF), USA: North Carolina, FN396825/—/FN398019/—; Jubula hutchinsiae subsp. pennsylvanica 10, Davison s.n. (UNAF), USA: North Carolina, FN396826/—/FN398020/—; Neohattoria herzogii (S.Hatt.) Kamim., Furuki 22673 (F), Japan: Honshu, KM817455*/KM817530*/KM817505*/KM817504*; Nipponolejeunea pilifera (Steph.) S.Hatt. 1, Ohnishi 5975 (HIRO), Japan, —/AM392293/FJ380228/AM396291; Nipponolejeunea pilifera 2, Higuchi 41359 (H?), Japan, AY776307/AY776304/AY776310/—; Nipponolejeunea pilifera 3, Masuzaki 510 (HIRO), Japan: Yakushima Is., —/AB476588/—/—; Nipponolejeunea pilifera 4, Ohnishi s.n. (H), Japan, AY125341/AY125937/AY144478/—; Nipponolejeunea subalpina (Horik.) S.Hatt. 1, Ohnishi 5611 (HIRO), Japan, DQ987289/AM392292/FJ380227/AM396290; Nipponolejeunea subalpina 2, Higuchi 41358 (H?), Japan, AY776306/AY776305/AY776311/—; Ptychanthus striatus (Lehm.) Nees, Gradstein 10217, Indonesia: Java, DQ987297/DQ983723/DQ987403/EF011777; Schiffneriolejeunea nymannii (Steph.) Gradst. & Terken, Gradstein et al. 10321, Malaysia, DQ987320/DQ983725/DQ987424/EF011801.